FastQCFastQC Report
Sun 21 May 2023
EGAF00007832460

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832460
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences100395
Sequences flagged as poor quality0
Sequence length235-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT3271132.58229991533443No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2145421.369590119029834No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG33583.3447880870561284No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG25762.565864833906071No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT22232.214253697893321No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG21922.1833756661188306No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG21422.1335723890632003No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG17571.7500871557348474No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT17261.7192091239603566No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG15771.5707953583345784No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT13491.3436924149609044No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT10291.0249514418048709No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT9530.9492504606803127No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG9010.8974550525424573No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT8700.8665770207679665No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT7700.7669704666567061No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT7330.7301160416355397No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG7070.7042183375666119No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT6890.686289157826585No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA6770.6743363713332338No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6660.663379650380995No Hit
GCTGCGTTCTTCATCGATGCGAGGTTGTTGAATGCGCGAGCGTCAGAAGG6590.6564071915932068No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG6390.6364858807709547No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT5810.5787140793864236No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC5440.5418596543652572No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT5130.5109816225907665No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA3960.3944419542805917No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA3940.3924498231983664No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC3750.37352457791722693No Hit
GCTGCGTTCTTCATCGATGCCATTGAGGTGTTCATGGAGTTTAACCGCTG3100.30878031774490766No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT2830.28188654813486724No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT2660.264953433935953No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT2640.26296130285372776No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG2590.25798097514816476No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCTGGCAAACT2550.25399671298371435No Hit
GCTGCGTTCTTCATCGATGCGGAGTATGATGCGGCTGCACAGCAAACCGA2300.22909507445589922No Hit
GCTGCGTTCTTCATCGATGCAAGAGCTGAGATATCCGTTGCCGAGAGTCG1990.1982170426814084No Hit
GCTGCGTTCTTCATCGATGCCTCTTCCGAAGCCGGACGATCGGGCAAACT1950.194232780516958No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1830.18227999402360676No Hit
GCTGCGTTCTTCATCGATGCCCTGTGGGTACTTGCCAGCCAAATGAAGAC1810.18028786294138155No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCAAGAGTCG1760.17530753523581852No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA1730.17231933861248072No Hit
GCTGCGTTCTTCATCGATGCGCCTTGAGGTTGTCCATCGTCATCATGGCA1710.1703272075302555No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1630.16235868320135466No Hit
GCTGCGTTCTTCATCGATGCGGCCGCCGTTCCCGCCGCGGCGTGCGTGGC1550.15439015887245383No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA1450.14442950346132774No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG1380.13745704467353953No Hit
GCTGCGTTCTTCATCGATGGGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1370.1364609791324269No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1320.13148065142686388No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAAGGCCGGACGATCGGGCAAACT1210.12052393047462522No Hit
GCTGCGTTCTTCATCGATGCCTTTGTATACAAGGCCGTCGGGGTCTACCG1200.11952786493351261No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1200.11952786493351261No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1160.11554360276906221No Hit
GCTGCGTTCTTCATCGATGCCGAGTCGGACCTCGCCGGGGATCACGTTCA1160.11554360276906221No Hit
GCTGCGTTCTTCATCGACACCAAGTGCTGCTGAAAGTGTATTCAGAATAT1150.11454753722794961No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCAAGATATCCGTTGCCGAGAGTCG1090.10857114398127396No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1090.10857114398127396No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGTTT1020.10159868519348572No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)