FastQCFastQC Report
Sun 21 May 2023
EGAF00007832470

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832470
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences142444
Sequences flagged as poor quality0
Sequence length235-238
%GC45

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA7266251.01092359102525No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2449817.19833759231698No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTTGCTGCGTTCTTCATCGA36912.5911937322737355No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTCGCTGCGTTCTTCATCGA36562.5666226727696495No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTGGCTGCGTTCTTCATCGA35402.485187161270394No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG35012.457807980680127No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTAGCTGCGTTCTTCATCGA24131.6939990452388305No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTCGCTGCGTTCTTCATCGAT23041.617477745640392No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTGGCTGCGTTCTTCATCGAT22091.5507848698435875No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTTGCTGCGTTCTTCATCGAT21141.4840919940467834No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTAGCTGCGTTCTTCATCGAT13720.9631855325601639No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG9590.6732470304119513No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTGGCTGCGTTCTTCATCGG5880.4127937996686417No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTTGCTGCGTTCTTCATCGG5660.3973491336946449No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTCGCTGCGTTCTTCATCGG5630.395243042880009No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCTAGGCATCCACCGTATGCCCTT4940.3468029541433827No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGTCGAGAGTCA4460.3131055011092078No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG4210.2955547443205751No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG4200.2948527140490298No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA4180.2934486535059392No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTAGCTGCGTTCTTCATCGG3230.22675577770913483No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTCGCTGCGTTCTTCATCGGC2980.20920502092050208No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTGGCTGCGTTCTTCATCGGC2910.2042908090196849No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2840.1993765971188678No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTTGCTGCGTTCTTCATCGGC2770.1944623852180506No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTAGCTGCGTTCTTCATCGGC2200.154446659739968No Hit
GCTGCGTTCTTCATCGATTCAAGAGCCGAGATATCCGTTGCCGAGAGTCA2050.14391620566678837No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT2030.14251214512369773No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1990.1397040240375165No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGATTCA1970.1382999634944259No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1930.13549184240824463No Hit
GCTGCGTTCTTCATCGATGCAAGAGCTGAGATATCCGTTGCCGAGAGTCA1900.13338575159360871No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCTGTTGCCGAGAGTCA1870.13127966077897277No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATTCGTTGCCGAGAGTCA1780.12496138833506501No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1590.11162281317570413No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1550.1088146920895229No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)