FastQCFastQC Report
Sun 21 May 2023
EGAF00007832471

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832471
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127944
Sequences flagged as poor quality0
Sequence length247-250
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC6055147.326173951103605No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1460511.415150378290502No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG123299.636247108109798No Hit
GGAAGTAAAAGTCGTAACAAGGATGTGCATGTACCCATCGTAAAGCGAAG45763.5765647470768465No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTCAC34032.6597573938598136No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC30492.3830738448071034No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC22711.7749953104483214No Hit
GGAAGTAAAAGTCGTAACAAGGCCAAGGTGACGCGCGGCGCGGAAAACGA18091.4138998311761397No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA12550.9808978928281123No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT12000.9379103357719002No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG10450.8167635840680297No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC10430.8152004001750766No Hit
GGAAGTAAAAGTCGTAACAAGGCAGAGTTGCACAAACTCTTTTTTAACTT9840.7690864753329582No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC9120.7128118551866441No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG7310.5713437128743826No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC7190.5619646095166636No Hit
GGAAGTAAAAGTCGTAACAAGGTGGCCATGGTGGATCGGATCGAAAGTGC6440.5033452135309198No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCAGAGCGTCATCGAGAACGGCGC5340.41737009941849557No Hit
GGAAGTAAAAGTCGTAACAAGGCACTGAAGGGGAAGGGAGGGAAGACGAT5070.39626711686362787No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC4600.35953229537922843No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC3760.2938785718751954No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3700.2891890201963359No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC3530.275901957106234No Hit
GGAAGTAAAAGTCGTAACAAAGCTGAGTTGCACAAACTCTTTTTTGATTT3420.26730444569499157No Hit
GGAAGTAAAAGTCGTAACAAGGGTGGGTGTGGTGTTCCAAGCAAGGCAGG2980.23291440005002187No Hit
GGAAGTAAAAGTCGTAACAAGGGGTGGGGCGGAAATGGTCGATGACGTGT2880.22509848058525606No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC2490.1946163946726693No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC2280.17820296379666103No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA2110.16491590070655912No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTTATGGCTCAAGCAGAGCAAAA2100.16413430876008253No Hit
GGAAGTAAAAGTCGTAACAAGGTACCCGAATGCCGGATTCCTCGCTAACA2030.15866316513474646No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC2000.1563183892953167No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAATCTATTATGGCAGGTGGAGGAGT1990.15553679734884013No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT1970.15397361345588695No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA1910.14928406177702744No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT1660.12974426311511286No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA1600.12505471143625335No Hit
GGAAGTAAAAGTCGTAACAAGGTGACGGGGATGGTTGCGAGTAGTGTCCA1550.12114675170387046No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTTACCGACA1530.11958356781091727No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTTAACCTGCGGAAGGATC1520.11880197586444069No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC1520.11880197586444069No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1510.1180203839179641No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC1430.11176764834615145No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1390.1086412805602451No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC1390.1086412805602451No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA1360.10629650472081535No Hit
GGAAGTAAAAGTCGTAACAAGGCTGAGTTGCACAAACTCTTTTTTGATTT1350.10551491277433878No Hit
GGAAGTAAAAGTCGTAACAAGGACCGGGCAATAAGCGTGGCGGAAAGAAC1300.10160695304195586No Hit
GGAAGTAAAAGTCGTAACAAGGCGGAGTTGCACAAACTCTTTTTTAACTT1290.10082536109547928No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)