FastQCFastQC Report
Sun 21 May 2023
EGAF00007832472

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832472
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences127944
Sequences flagged as poor quality0
Sequence length235-238
%GC59

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4747937.10920402676171No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1444811.292440442693678No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT121379.486181454386294No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT58964.608266116425936No Hit
GCTGCGTTCTTCATCGATGCACTGATCTCGCAGATGAGCGAGCAGCCCAT45493.5554617645219784No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT38272.9911523791658854No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT34342.683986744200588No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG23041.8007878446820484No Hit
GCTGCGTTCTTCATCGATGCGACGCGGGTAGGTGCGCCAGAAGTTCTCGA18021.4084286875508036No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT16411.2825923841680735No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA14021.0957919089601702No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG13831.080941661977115No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA11610.9074282498593135No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT10430.8152004001750766No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA9860.7706496592259113No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC8980.701869567935972No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGGC7800.6096417182517352No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT6890.538516851122366No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC6690.5228850121928343No Hit
GCTGCGTTCTTCATCGATGCCGCTGCTATTGCCGTGAATGCCTCGACGCG6490.5072531732633027No Hit
GCTGCGTTCTTCATCGATGCAACGGCGGCACTCTTCTCGCGAGATTTCTT5320.41580691552554244No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT5260.4111173638466829No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT5250.41033577190020637No Hit
GCTGCGTTCTTCATCGATGCGCCTTGAGGTTGTCCATCGTCATCATGGCA5070.39626711686362787No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4570.35718751953979866No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4110.3212342900018758No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG3720.2907522040892891No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3470.27121240542737446No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG3430.26808603764146816No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGATG3320.2594885262302257No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG3130.24463827924717063No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA3120.24385668730069407No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG3070.23994872756831115No Hit
GCTGCGTTCTTCATCGATGCGCTGTCGGTAAGCTGCGTTCTTCATCGATG2930.22900644031763895No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC2840.22197211279934972No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2500.19539798661914587No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA2360.18445569936847372No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT2310.18054773963609078No Hit
GCTGCGTTCTTCATCGATGCCGCACGCGGAGAATGCACCGACACAGCAGC2300.17976614768961421No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT2280.17820296379666103No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC2130.1664790845995123No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2020.15788157318826987No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC2000.1563183892953167No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1960.1531920215094104No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1920.15006565372350403No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1870.1461576939911211No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA1820.14224973425873821No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG1770.13834177452635527No Hit
GCTGCGTTCTTCATCGATGCCATTGAAAGTATACCAATAGCTTTCTCTAT1740.13599699868692552No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1560.12192834365034703No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCGTTGCCGAGAGTCG1510.1180203839179641No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1510.1180203839179641No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT1420.11098605639967486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)