FastQCFastQC Report
Sun 21 May 2023
EGAF00007832484

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832484
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51632
Sequences flagged as poor quality0
Sequence length235-238
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2724052.7579795475674No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG30745.953672141307717No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT29315.676712116516889No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT23504.551440966842268No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG16593.2131236442516267No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG12782.4752091726061356No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7091.373179423613263No Hit
GCTGCGTTCTTCATCGATGCGTGAGCCGAGATATCCGTTGCCGAGAGTCG6301.2201735357917571No Hit
GCTGCGTTCTTCATCGATTGCATAGACAAGTTCATAAGTATCAAGACTGT6151.1911217849395723No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA5901.142702200185931No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT4750.9199721103191819No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA4660.9025410598078711No Hit
GCTGCGTTCTTCATCGATGCAGACAACGATCAAATCCAAGCCGCCCATGA4500.8715525255655409No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATACGTTGTTGAAAGTTT4250.8231329408118996No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCGTCTTTTCTTCTTGTTT4060.7863340563991325No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA3630.7030523706228695No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA3370.6526960024790828No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT3230.6255810350170437No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC2770.536488999070344No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2550.49387976448713977No Hit
GCTGCGTTCTTCATCGATGCCATATTCCAGTTTGACACATCAGGGTTTGC2380.46095444685466375No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT2110.4086612953207313No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT2090.4047877285404401No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG2010.38929346141927484No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTA1730.3350635264951968No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT1710.33118995971490545No Hit
GCTGCGTTCTTCATCGATGCAATATCGGCTTGTGCTGTCTTAAACGCAGC1660.32150604276417727No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1590.3079485590331577No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1560.3021382088627208No Hit
GCTGCGTTCTTCATCGATGCACCCACGCCAAAGAAAAGAATGCGTCTTCC1500.29051750852184693No Hit
GCTGCGTTCTTCATCGATGCCACCAGGCAGACCTACGAATACGCCGAAGT1440.27889680818097307No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1340.2595289742795166No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1310.25371862410907964No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT1280.2479082739386427No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1230.23822435698791447No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1170.2266036566470406No Hit
GCTGCGTTCTTCATCGATGCGGTAGCCAGTGGTGAACTCAATCCGCTTGG1170.2266036566470406No Hit
GCTGCGTTCTTCATCGATGCACTCAACAGTTGGCAACTTGTCAAGGAGCT1090.21110938952587543No Hit
GCTGCGTTCTTCATCGACTCTTACTACCAAGGCATCCTTTGTGTGCCCTT1050.20336225596529284No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1010.19561512240471027No Hit
GCTGCGTTCTTCATCGATGCTTCTGAGAATTTCTCAGCATCTACGGAAGC970.18786798884412767No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT910.17624728850325377No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT880.17043693833281687No Hit
GCTGCGTTCTTCATCGATGCGACTGAGCAGTAGAACGTGTGGAGAATATC870.1685001549426712No Hit
GCTGCGTTCTTCATCGATGCCACCTGTTGTGTATAACTAATAATCGTATT810.15687945460179734No Hit
GCTGCGTTCTTCATCGATGCTCGCACCTGCAGGCTGACGCCAAACCCCAG740.1433219708707778No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC730.14138518748063217No Hit
GCTGCGTTCTTCATCGATGCCCACCCAGCCCTCCTGGAGCCTCCTGGTAC700.13557483731019523No Hit
GCTGCGTTCTTCATCGATGCTGCCAGAAGCGTTCTTCAGATGCTTCTGAG690.13363805392004957No Hit
GCTGCGTTCTTCATCGATGAGCTGGTCGTTGGCGTCGAACATTTGGTAAT570.11039665323830183No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT550.10652308645801054No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)