FastQCFastQC Report
Sun 21 May 2023
EGAF00007832493

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832493
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences116350
Sequences flagged as poor quality0
Sequence length247-250
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3739932.14353244520842No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1928816.577567683712935No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC115609.935539321014181No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG62915.406961753330468No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT60895.233347657928664No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG46574.002578427159433No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGAGAAACACGTCAAAGGCCTAAGAA26892.311130210571551No Hit
GGAAGTAAAAGTCGTAACAACAGGAGAGCGTCAGCCAATCGACGCAATCG21761.8702191663085517No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC18081.5539321014181349No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC12011.0322303394929093No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC11150.9583154275891705No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA10880.9351095831542758No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC9960.8560378169316717No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT7290.6265577997421573No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC5860.5036527718091964No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG5180.4452084228620541No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGGTGTGGTGTTCCAAGCAAGGCAGG4720.40567253975075207No Hit
GGAAGTAAAAGTCGTAACAAGGATGTGCATGTACCCATCGTAAAGCGAAG4120.3541039965620971No Hit
GGAAGTAAAAGTCGTAACAAGGCCAGCACGCCCATGCCCGCCACCAAAGT4110.35324452084228625No Hit
GGAAGTAAAAGTCGTAACAAGGTCGTCTAAATCGATGGTGCGGCTGATCT4080.35066609368285345No Hit
GGAAGTAAAAGTCGTAACAAGGCGGAGTGGGAGGCCTACAGCGCCGGGAT4020.345509239363988No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC3940.33863343360550063No Hit
GGAAGTAAAAGTCGTAACAAGGACGACAAAGAAGACGACAAGAAAGACGA3330.2862054146970348No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA3000.25784271594327457No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG1960.1684572410829394No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGACA1790.15384615384615385No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1630.1400945423291792No Hit
GGAAGTAAAAGTCGTAACAAGGACGTGGGGCAGAAGGTGGAAAATGCGTG1620.1392350666093683No Hit
GGAAGTAAAAGTCGTAACAAGGGGTGAGGGAGTTTTGGCAGGGCAGGGAT1610.13837559088955736No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCAGGCA1610.13837559088955736No Hit
GGAAGTAAAAGTCGTAACAAGGCTACGGAAAAGAAGGTTTTGGTGGGCAA1580.13579716373012463No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGGAGAGAAACGATGAGCCTGGAT1400.12032660077352815No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1380.11860764933390633No Hit
GGAAGTAAAAGTCGTAACAAGGCCTTGGGTCCAGGCCAGGCCACTGTGCT1370.1177481736140954No Hit
GGAAGTAAAAGTCGTAACAAGGAAATGCGGATCCTCATGTTGGGCCTGGA1370.1177481736140954No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC1240.10657498925655351No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGGAAGCGGATACTGCACCTGCACC1240.10657498925655351No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT1220.10485603781693166No Hit
GGAAGTAAAAGTCGTAACAAGGCGGGCACAAAGGCGATCGTATCGTATCC1200.10313708637730984No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1190.10227761065749892No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)