FastQCFastQC Report
Sun 21 May 2023
EGAF00007832496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences73077
Sequences flagged as poor quality0
Sequence length237-238
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGACTCGAAACGCCTAGGCATCCACCGTATGCCCTT1902526.034183121912502No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT56397.716518193138744No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC44946.149677737181329No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG39825.44904689574011No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGAT39795.44494163690354No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGATG24783.390943799006527No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA24543.3581017283139705No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT21272.9106285151278786No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCTCCCTGACCAT14441.9759979200021895No Hit
GCTGCGTTCTTCATCGATGCCAGCTCGCTTACAGTTACAAATTCGGTAAG11151.5257878675917185No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA10961.4997878949601104No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAAGTCA10291.4081037809433885No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGGCAGGTCGT9431.2904196942950588No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT9191.2575776236025014No Hit
GCTGCGTTCTTCATCGAAGAGGAACTCCGCCAAGGACTTCGCAAGTTCGG7100.9715779246548161No Hit
GCTGCGTTCTTCATCGATGCCATTGAAAGTATACCAATAGCTTTCTCTAT6010.822420186926119No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG5500.7526307867044351No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGGC5190.7102097787265487No Hit
GCTGCGTTCTTCATCGATGCATGGTCATCATGTGGTGAGAAATCTTTTAA5090.6965255826046499No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT4970.6801045472583713No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4620.6322098608317254No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTTTGCTTTTCTCTTTACGCT4420.6048414685879278No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT4360.5966309509147885No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG3880.5309468095296742No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC3440.4707363465933194No Hit
GCTGCGTTCTTCATCGCAGCGACAGCCGTGAGCGCGGCGCCGTAGACATT3420.4679995073689396No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGGCT3230.4419995347373319No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCCGGGAAGGTCA3100.42421007977886344No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG2960.40505220520820506No Hit
GCTGCGTTCTTCATCGATGCCCTTGAGAATCGTCTGCACCCGGAAGCCTT2870.3927364286984961No Hit
GCTGCGTTCTTCATCGATGCCCAGTGCGGCAGCCGAACGGAATATCGCCC2700.3694732952912681No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA2320.3174733500280526No Hit
GCTGCGTTCTTCATCGATGCGACAGCCGTGAGCGCGGCGCCGTAGACATT2300.3147365108036729No Hit
GCTGCGTTCTTCATCGATGCCCATACGAATGATCGGAAGGTGGAAAAGGG2190.29968389506958415No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1950.26684182437702697No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCAAGGCATCCACCGTATGCCCTT1920.2627365655404573No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGTC1910.26136814592826746No Hit
GCTGCGTTCTTCATCGATGCCGTTCTTTCCTGCAAGAAGCGCCTGCCAGA1860.25452604786731803No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC1850.25315762825512816No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT1820.2490523694185585No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1750.2394734321332293No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG1740.23810501252103947No Hit
GCTGCGTTCTTCATCGATGATTTGCTGCAGCGTCGTATCCTCACCGACAC1740.23810501252103947No Hit
GCTGCGTTCTTCATCGATGCCCTCTTCATCTCCGAAAAGAATGACACCGA1630.22305239678695074No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG1570.21484187911381147No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCTGC1330.1819998084212543No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT1310.17926296919687454No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGTACCAAAATCC1300.17789454958468465No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1260.1724208711359251No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG1260.1724208711359251No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGACGAGCTTCT1250.17105245152373522No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1160.1587366750140263No Hit
GCTGCGTTCTTCATCGATGCCAGTACCAAGTGCCTTACGGACACCACGAG1150.15736825540183644No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG1130.15463141617745665No Hit
GCTGCGTTCTTCATCGATGAGGAACTCCGCCAAGGACTTCGCAAGTTCGG1110.15189457695307687No Hit
GCTGCGTTCTTCATCGATGCCAGAGAGACTCGTCGGCGCAGAAACGCGAA1090.14915773772869712No Hit
GCTGCGTTCTTCATCGATGCAATCGGTGGGGTTGAGAACGTTAGCAGTGT1090.14915773772869712No Hit
GCTGCGTTCTTCATCGATGACGACAAGCCCGTACGCGCCCCAGTTCAGGC1070.14642089850431736No Hit
GCTGCGTTCTTCATCGATGCAGCGGTATTCGTATTTGAGGAACACCTTCA1060.14505247889212747No Hit
GCTGCGTTCTTCATCGATGCGCAGATAGCTTTTGACCGCCGTCAGCTCCT1050.1436840592799376No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGTCT1010.13821038083117806No Hit
GCTGCGTTCTTCATCGATGCCGCCATGGTGGGCCATTTAGGCTCGGCGGC990.1354735416067983No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC980.13410512199460844No Hit
GCTGCGTTCTTCATCGATGCAACCCTTATCTGCAGCAGCAGGAATCTCTG950.12999986315803877No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT940.12863144354584888No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA930.12726302393365901No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT910.12452618470927924No Hit
GCTGCGTTCTTCATCGATGCCACCGCCGACGAAGGTGACGGCCAACAGGA900.12315776509708937No Hit
GCTGCGTTCTTCATCGATGCCCGCGCCGTCGTCCGTGACCATGATGACGA870.11905250626051973No Hit
GCTGCGTTCTTCATCGATGCAGTTAAGGATATGAAGGGTTTTGGATGGGA840.11494724742395009No Hit
GCTGCGTTCTTCATCGATGCCCGCGAGACTCGTCGGCGCAGAAACGCGAA830.11357882781176021No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGGACTAAGATTC800.10947356897519055No Hit
GCTGCGTTCTTCATCGATGCCGCCGATTCCGGAGAAGGCCTGCTCGGGAA790.10810514936300067No Hit
GCTGCGTTCTTCATCGCTGTTATCGCCGCTGTTATTGTCGCTGCGGTTCC780.10673672975081078No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCTGCT750.10263147091424114No Hit
GCTGCGTTCTTCATCGATGCCGCACACGATTTACGGGACCCCGGTTGTTC740.10126305130205127No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT740.10126305130205127No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)