FastQCFastQC Report
Sun 21 May 2023
EGAF00007832502

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832502
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences152504
Sequences flagged as poor quality0
Sequence length237-238
%GC60

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG5163933.86075119341132No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT3322121.783690919582437No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGAT2153814.122908251586844No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG46043.018937208204375No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG44412.9120547657766354No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT43822.8733672559408276No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGATG32422.1258458794523425No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGGC21421.4045533231915228No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA20881.3691444158841735No Hit
GCTGCGTTCTTCATCGATGCAGTCCATGATATTAGCCACTACCATACATA17771.1652153386140691No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT14660.9612862613439648No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA11920.7816188427844515No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA7260.4760530871321408No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGCC7100.4655615590410743No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT6640.4353984157792583No Hit
GCTGCGTTCTTCATCGATGCGAGGTTGTTGAATGCGCGAGCGTCAGAAGG4370.2865498609872528No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4090.26818968682788646No Hit
GCTGCGTTCTTCATCGATGCGCCTGACAAGGATGCCATTGAGAAGAATAT3760.24655091014006192No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGGCT3560.23343650002622882No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT3200.20983056182132925No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2950.19343754917903794No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTTT2910.19081466715627132No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG2630.17245449299690502No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG2550.1672087289513718No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2490.16327440591722184No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC2450.16065152389445522No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTGC2280.1495042752976971No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2160.14163562922939726No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2050.13442270366678907No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2050.13442270366678907No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1980.1298326601269475No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG1910.12524261658710592No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1860.12196401405864764No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)