FastQCFastQC Report
Sun 21 May 2023
EGAF00007832505

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832505
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences93140
Sequences flagged as poor quality0
Sequence length247-250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5475458.78677260038651No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT36983.9703671891775825No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT24772.6594374060554005No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG18231.9572686278720206No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAAAGGACCGGAATCTGCTTCATACG14841.593300407987975No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC11461.2304058406699592No Hit
GGAAGTAAAAGTCGTAACAAGGATAGAGACTTGGTATGAGTGCTGGAAGG10651.143439982821559No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA9891.0618423878033068No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA8790.9437406055400474No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT8780.9426669529740176No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC8660.929783122181662No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC8560.9190465965213658No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA8380.8997208503328323No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG8090.8685849259179729No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC8060.865363968219884No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC5870.6302340562593944No Hit
GGAAGTAAAAGTCGTAACAAGGAGAGCAGCCATAGCAGTTGTTTGCGACG5790.6216448357311574No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC5440.5840669959201202No Hit
GGAAGTAAAAGTCGTAACAAGGCATGAAGACTGCAACACTTTCCAAGCAT5140.5518574189392312No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC4910.5271634099205497No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC4840.5196478419583422No Hit
GGAAGTAAAAGTCGTAACAAGGATGTGCATGTACCCATCGTAAAGCGAAG4690.5035430534678977No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA4090.4391238995061198No Hit
GGAAGTAAAAGTCGTAACAAGGATGCATACAAGGGTCGAGGAAAGACAGG3460.37148378784625297No Hit
GGAAGTAAAAGTCGTAACAAGTCCACAGGATTTAGTATCCATGGTTGTTG3440.36933648271419367No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT3210.34464247369551215No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGAAGGACTACAGAAAGAAACAGGG3030.3253167275069787No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC2760.29632810822417865No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC2720.2920334979600601No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAATCTATTATGGCAGGTGGAGGAGT2690.28881254026197123No Hit
GGAAGTAAAAGTCGTAACAAGGTTCCAGACCGAAGAGATAGAGCTGCGAT2670.28666523512991193No Hit
GGAAGTAAAAGTCGTAACAAGGTGCGAGACCTCGAAGACCTGATGGAAAA2580.27700236203564527No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2320.24908739531887483No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC2260.242645479922697No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA2090.22439338630019326No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC2040.21902512347004507No Hit
GGAAGTAAAAGTCGTAACAAGTCCGGAAGCTCTTGCGATGATGAGAGCAA1890.20292033497960063No Hit
GGAAGTAAAAGTCGTAACAAGGAGAAATGATGTCGATCAAGAAGATTGCG1680.1803736310929783No Hit
GGAAGTAAAAGTCGTAACAAGGTAGGAGAAGAAGAGCCCAGGCGAGGCAA1430.15353231694223748No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1360.14601674898003006No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGACGGATC1240.13313291818767445No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC1230.13205926562164483No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA1210.12991196048958556No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTTCGGAAGGATC1150.12347004509340777No Hit
GGAAGTAAAAGTCGTAACAAGTCCACAGGATTTAGTATCTATGGTAGTTG1100.11810178226325961No Hit
GGAAGTAAAAGTCGTAACAAGGCGATGAGGGGTTGGCCTTGATGCCCGCG1100.11810178226325961No Hit
GGAAGTAAAAGTCGTAACAAGGATAGACTATGGAACAAACACCTAAAGCA1100.11810178226325961No Hit
GGAAGTAAAAGTCGTAACAAGGATATGAAGATTGTCAATATGATGCAGAC1090.11702812969722999No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT1080.11595447713120034No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1030.11058621430105219No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCTTAGGTGAACCTGCGGAAGGATC1020.10951256173502254No Hit
GGAAGTAAAAGTCGTAACAAGGTTGATGGTAGTAAATGAATTATTGCCAC1010.10843890916899292No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC1000.1073652566029633No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC980.10521795147090403No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACTTGCGGAAGGATC960.10307064633884476No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC960.10307064633884476No Hit
GGAAGTAAAAGTCGTAACAAGGCTGAGAAAGGCGTCATCATTATTGACTA950.10199699377281511No Hit
GGAAGTAAAAGTCGTAACAAAACCAACACGTTTTGTCCATCCTTCAAGTT940.10092334120678549No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)