FastQCFastQC Report
Sun 21 May 2023
EGAF00007832532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences140177
Sequences flagged as poor quality0
Sequence length236-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT3599225.676109490144604No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2232715.927719954058084No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGATG1614411.51686795979369No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT58304.15902751521291No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCGAT56043.9978027779164913No Hit
GCTGCGTTCTTCATCGATGCAGGTAACGACGCTGCGTTCTTCATCGATGC38832.770069269566334No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGATGA27621.9703660372243665No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT23361.6664645412585517No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT22091.5758647995034851No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG21271.5173673284490323No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGAGCAAACT21201.5123736418956033No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA20241.4438887977342931No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGATGC16011.1421274531485193No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGGCT16001.1414140693551724No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA15301.0914772038208838No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG14321.0215655920728792No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA11690.8339456544226229No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT11380.8118307568288664No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT10500.7490529830143319No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT8410.5999557702048125No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG7840.5592928939840345No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT7600.5421716829437069No Hit
GCTGCGTTCTTCATCGATGTAAGGTAACGACGCTGCGTTCTTCATCGATG7480.5336110774235431No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG6560.46797976843562067No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCGGC6290.4487184060152522No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT6280.44800502222190514No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT6130.43730426532170047No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGGCTC5390.3845138646140237No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3870.2760795280252823No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCCTTG3750.26751892250511855No Hit
GCTGCGTTCTTCATCGATGCAGGTAACGACGCTGCGTTCTTCATCGGCTC3520.2511110952581379No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC3500.24968432767144394No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC3410.24326387353132115No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA2990.21330175421074785No Hit
GCTGCGTTCTTCATCGATGCGATAGCCGAGATATCCGTTGCCGAGAGTCG2830.2018876135171961No Hit
GCTGCGTTCTTCATCGATGCAGGTAACGACGCTGCGTTCTTCATCGATGA2390.17049872660992887No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTGAGAGTTG2380.1697853428165819No Hit
GCTGCGTTCTTCATCGATGCGGATGTAGGAGCCGTCGGGACGACGAACTT2300.16407827246980602No Hit
GCTGCGTTCTTCATCGATGCACACCCGTTTGACCCGCAAGCGCAGGATAT1990.14196337487604957No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA1950.13910983970266164No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1900.13554292073592672No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1900.13554292073592672No Hit
GCTGCGTTCTTCATCGATGCCCGAACCAAGAGATCCGTTGTTGAAAGTTT1790.1276956990091099No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT1750.12484216383572197No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1720.12270201245568103No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTTTTGAAAGTTT1710.12198862866233404No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1640.11699494210890517No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT1620.11556817452221121No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCCTT1610.11485479072886422No Hit
GCTGCGTTCTTCATCGATGCAATATCGGCTTGTGCTGTCTTAAACGCAGC1590.11342802314217026No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT1540.10986110417543535No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1530.10914772038208835No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1500.10700756900204741No Hit
GCTGCGTTCTTCATCGATGCAGATCGTGTAATCTTTGGTTTTTGATTCAA1490.10629418520870042No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCCTTGA1440.10272726624196553No Hit
GCTGCGTTCTTCATCGATGCTGAGTAAAGCAGACTGGCCACCTGTCTTCT1440.10272726624196553No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGGCGAGAGTCG1440.10272726624196553No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1440.10272726624196553No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCTACTCT1440.10272726624196553No Hit
GCTGCGTTCTTCATCGATGCGGTAACGACGCTGCGTTCTTCATCGATGCG1440.10272726624196553No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)