FastQCFastQC Report
Sun 21 May 2023
EGAF00007832554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences147290
Sequences flagged as poor quality0
Sequence length237-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT6890346.78050105234571No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2270615.415846289632698No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG63584.316654219566841No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG55023.735487813157716No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGAT37212.5263086428134973No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT28311.9220585240002717No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT21581.46513680494263No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT19671.3354606558490054No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG19061.2940457600651776No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT16611.1277072442120986No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT16021.087650213863806No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG15771.0706768959196142No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT14240.966800190101161No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT12930.8778600040735962No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG12650.8588498879761016No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC12390.8411976373141422No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT11470.7787358272795166No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG11110.7542942494398805No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT10010.6796116504854369No Hit
GCTGCGTTCTTCATCGACGCACGAGCCGAGTGATCCACCGCTAAGAGTCG7740.5254939235521761No Hit
GCTGCGTTCTTCATCGATGCCTTGCAATGGGTCTTCATAGTGCCTATCCA6680.453527055468803No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG6670.45284812275103536No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG6340.43044334306470233No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA6330.42976441034693463No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT5730.3890284472808745No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGCC3650.24781044198519928No Hit
GCTGCGTTCTTCATCGATGAGATTCGGTTACGCTGCGTTCTTCATCGATG3330.22608459501663383No Hit
GCTGCGTTCTTCATCGATGCCGAGCCAGAAGTGATGGTTTTAGTGGGGAA2710.18399076651503835No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA2690.18263290107950303No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA2650.17991717020843234No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG2380.16158598682870529No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT2340.1588702559576346No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA2280.1547966596510286No Hit
GCTGCGTTCTTCATCGATGCAGATTCGGTTACGCTGCGTTCTTCATCGGC2240.1520809287799579No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGCGCAAACT2130.14461266888451355No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2050.13918120714237217No Hit
GCTGCGTTCTTCATCGATGCACACATGGGGGCCACGTCAGGTGACCACTC1720.11677642745603911No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG1580.10727136940729173No Hit
GCTGCGTTCTTCATCGATTAGTGACTGTTGGGCCCCACTGCTGCGACTCT1550.10523457125398872No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1540.10455563853622107No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)