FastQCFastQC Report
Sun 21 May 2023
EGAF00007832557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81998
Sequences flagged as poor quality0
Sequence length247-250
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG2194326.760408790458307No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT1313216.015024756701383No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1159114.135710627088466No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1109713.533256908705091No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG39764.848898753628137No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA20862.543964486938706No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG19602.3903022024927436No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC15931.942730310495378No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGGAGGAGGTGCCAGGAATTTG13561.6536988707041635No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC10201.2439327788482646No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGATAGTCCTGAAGTATCTCTTCA9871.2036878948267031No Hit
GGAAGTAAAAGTCGTAACAAGGCAAAAATAGACAAGTGGGACTATATCAA6680.8146540159516085No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT6620.8073367643113246No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC5620.6853825703065929No Hit
GGAAGTAAAAGTCGTAACAAGGATGTGCATGTACCCATCGTAAAGCGAAG2620.31951998829239736No Hit
GGAAGTAAAAGTCGTAACAAGGAGGTTTTGCCATGAGAAGTTTTTCCAGG2470.3012268591916876No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC2090.2548842654698895No Hit
GGAAGTAAAAGTCGTAACAAGTCCTTAATCGGCGGCAGCGCCGCAATGGA1710.2085416717480914No Hit
GGAAGTAAAAGTCGTAACAAGGAGATCGAGAACAAGGAGGTTTTGCCATG1610.19634625234761827No Hit
GGAAGTAAAAGTCGTAACAAGGCGGAAAGGTAAAAGAGCACCTGCTGATT1590.1939071684675236No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG1580.19268762652747629No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC1450.17683358130686114No Hit
GGAAGTAAAAGTCGTAACAAGGTCAAGAGGTGATCACTATTAGCTGGTCT1390.16951632966657723No Hit
GGAAGTAAAAGTCGTAACAAGGCAGTAAAGCACCGGCGGGCAGGGAGGTA1370.1670772457864826No Hit
GGAAGTAAAAGTCGTAACAAGGCACAGTCAAATAAGGGCTGGCACGTGCG1290.15732091026610406No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1260.1536622844459621No Hit
GGAAGTAAAAGTCGTAACAAGGTGCGCAGCATGTCGAACTCGCTGATCGG1190.14512549086563087No Hit
GGAAGTAAAAGTCGTAACAAACAGGGAGTTGTGGTGGGAAGGAGCTTGCA1180.14390594892558353No Hit
GGAAGTAAAAGTCGTAACAAGGATAGGTGAAATCTCAGAGAAAGGGTAGA1170.14268640698553622No Hit
GGAAGTAAAAGTCGTAACAAGGGGAAGCAGATCGGCATCGTGACGGGAAT1110.13536915534525232No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACGACATAAACTACTTGAGTACTAA1040.12683236176492108No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAAGGAAGGAGGTGGGGACGGAGGG1040.12683236176492108No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT920.11219785848435328No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGTTT890.10853923266421132No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGAGCTGGCTCCCCTGCACACAATCA880.10731969072416402No Hit
GGAAGTAAAAGTCGTAACAAGTAGGCAGGGTGTTGCCCTTCAGAATATTC880.10731969072416402No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGGTTGTCATGCTACAGAGTGGTCCT840.10244152296397474No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)