FastQCFastQC Report
Sun 21 May 2023
EGAF00007832558

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832558
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences81998
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2147226.186004536696018No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1297215.819898046293812No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1099313.406424546940169No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG50736.186736261860045No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG39794.852557379448279No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT34774.240347325544525No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT20442.492743725456718No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC19432.3695699895119393No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG13671.667113832044684No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA9951.2134442303470816No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG9761.1902729334861826No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG8781.0707578233615453No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT6780.8268494353520818No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA6570.801239054611088No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT5870.7158711188077758No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5520.6731871509061196No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA5420.6609917315056465No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT5380.6561135637454572No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT5300.6463572282250787No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT4860.5926973828629967No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA4440.5414766213810093No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC4040.49269494377911655No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA3560.4341569306568453No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG2650.32317861411253934No Hit
GCTGCGTTCTTCATCGATGCGCTGATCTCGCAGATGAGCGAGCAGCCCAT2560.31220273665211346No Hit
GCTGCGTTCTTCATCGATGCCTACCTGGTGGATGACAGCGTGAGTGACAC2250.2743969365106466No Hit
GCTGCGTTCTTCATCGATGCTCTCGGCAAAGGCACTCGCCTCGGCCCGGA2210.2695187687504573No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2010.24512792994951094No Hit
GCTGCGTTCTTCATCGATGCCTCCCCAGTATCTCCTGCTCTCTTTTGCAT1880.22927388472889582No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1690.2061025878679968No Hit
GCTGCGTTCTTCATCGATGCCGAGAAAAAAGCCTTTTTTCTCGGCATCGA1550.18902900070733433No Hit
GCTGCGTTCTTCATCGATGCAAGAACCAAGAGATCCGTTGTTGAAAGTTG1500.18293129100709773No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1480.1804922071270031No Hit
GCTGCGTTCTTCATCGATGCTGGTAATGTATGGCTCCTCAGGCCAGACAG1370.1670772457864826No Hit
GCTGCGTTCTTCATCGATGCCACACCTAACCAAATCTGTCCTGTTGCTTC1260.1536622844459621No Hit
GCTGCGTTCTTCATCGACGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1220.14878411668577282No Hit
GCTGCGTTCTTCATCGATGCCGAGAAGTTGGAGCGCGGGCGCCGCGTCTA1180.14390594892558353No Hit
GCTGCGTTCTTCATCGATGCCTGGGATTCAAGCTCCTCCGAGGGCCTGCG1160.14146686504548892No Hit
GCTGCGTTCTTCATCGATGCAGACCTGTGTCTACCCTCGTGTGACACTGG1150.1402473231054416No Hit
GCTGCGTTCTTCATCGATGCCGAGTCGGACCTCGCCGGGGATCACGTTCA1080.13171052952511036No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1070.13049098758506306No Hit
GCTGCGTTCTTCATCGATGCACATGACTAAGCCTTGCTGTGGGAAAGGAT1050.1280519037049684No Hit
GCTGCGTTCTTCATCGATGCAGCCCAAGGAACAAAATCAGGGGCCAGGTA1010.12317373594477914No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT890.10853923266421132No Hit
GCTGCGTTCTTCATCGATGCCTCTCGCCTGGTGTATGATGGCGTTCGGGA890.10853923266421132No Hit
GCTGCGTTCTTCATCGATGCACACAGTGGTGCCCGCCTGCTCGTTCCTCT850.10366106490402205No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)