FastQCFastQC Report
Sun 21 May 2023
EGAF00007832560

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832560
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65824
Sequences flagged as poor quality0
Sequence length237-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1895428.794968400583375No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT65419.937105007292173No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT56688.610841030627126No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG49177.469919786096256No Hit
GCTGCGTTCTTCATCGATGCACCGCAATGGAGCTGCGTTCTTCATCGATG42456.449015556635877No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT25413.860294117647059No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA22303.387822070977151No Hit
GCTGCGTTCTTCATCGATGCTACCGCAATGGAGCTGCGTTCTTCATCGAT13452.0433276616431697No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGAGCTGCGTTCTTCATCGATGCC13402.035731648031113No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT9701.4736266407389402No Hit
GCTGCGTTCTTCATCGATGCCCGCAATGGAGCTGCGTTCTTCATCGATGC6360.9662129314535731No Hit
GCTGCGTTCTTCATCGATGCACCGCAATGGAGCTGCGTTCTTCATCGGCT5700.8659455517744288No Hit
GCTGCGTTCTTCATCGATGACCGCAATGGAGCTGCGTTCTTCATCGATGA4470.6790836169178415No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA4110.6243923189110355No Hit
GCTGCGTTCTTCATCGATGTACCGCAATGGAGCTGCGTTCTTCATCGATG3850.5848930481283422No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3390.5150097228974235No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3350.5089329120077782No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3100.47095284394749637No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA3080.4679144385026738No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT2930.44512639766650464No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC2930.44512639766650464No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA2890.4390495867768595No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2730.414742343218279No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2670.40562712688381136No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2050.3114365580943121No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2030.30839815264948955No Hit
GCTGCGTTCTTCATCGATGCTACCGCAATGGAGCTGCGTTCTTCATCGGC1810.2749756927564414No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1740.26434127369956245No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1710.2597836655323286No Hit
GCTGCGTTCTTCATCGATGCGCTCTTCAGCCCTCTGGATCTTAGCCTTCT1700.2582644628099174No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1640.24914924647544967No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGAGCTGCGTTCTTCATCGGCTCT1550.23547642197374818No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA1480.22484200291686923No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1380.20964997569275645No Hit
GCTGCGTTCTTCATCGATGCTTGGTTGTTTGGTTTGTGATCCTAAAATGT1350.2050923675255226No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1240.18838113757899855No Hit
GCTGCGTTCTTCATCGATGCCGCCGCCGACGAAAGTGACAGCCAGCAGGA1160.1762275157997083No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1140.17318911035488577No Hit
GCTGCGTTCTTCATCGATGCGCAATGGAGCTGCGTTCTTCATCGATGCGC1110.1686315021876519No Hit
GCTGCGTTCTTCATCGATGCGCCCCCAGGCCTGTTTGACGATCAGGCCGT1060.16103548857559552No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGAGCTGCGTTCTTCATCGATGCG1050.15951628585318425No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC1010.15343947496353913No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC980.1488818667963053No Hit
GCTGCGTTCTTCATCGATGCTTCTTGAATAGTAACCTTTTCTAAGCACTA940.14280505590666018No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG940.14280505590666018No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT920.13976665046183762No Hit
GCTGCGTTCTTCATCGATGCACCGCAATGGAGCTGCGTTCTTCATCCAGC890.13520904229460382No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG880.1336898395721925No Hit
GCTGCGTTCTTCATCGATGACCGCAATGGAGCTGCGTTCTTCATCGATGC870.13217063684978123No Hit
GCTGCGTTCTTCATCGATGCCCGCAATGGAGCTGCGTTCTTCATCGGCTC830.1260938259601361No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG810.12305542051531355No Hit
GCTGCGTTCTTCATCGCTGTCAGATACCTTGGCATCCTTCGTATGCCCTT800.12153621779290229No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGAGCTGCGTTCTTCATCGATGCA750.11394020418084588No Hit
GCTGCGTTCTTCATCGATGCGGTCGCGGTCGGCGCAGTCCACTACGAAGA740.11242100145843462No Hit
GCTGCGTTCTTCATCGTTTCAAAACGCCTAGGCATCCGCCGTATGCCCTT730.11090179873602334No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG730.11090179873602334No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCTAGAGTCG730.11090179873602334No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT720.10938259601361207No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG710.10786339329120077No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG690.10482498784637823No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG670.10178658240155566No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG660.1002673796791444No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)