FastQCFastQC Report
Sun 21 May 2023
EGAF00007832562

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832562
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences113733
Sequences flagged as poor quality0
Sequence length235-238
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3272828.776168746098318No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1764315.512648044103294No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1401912.326237767402601No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1301611.44434772669322No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA57165.025806054531227No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT22591.9862309092347867No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG19921.7514705494447522No Hit
GCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTAAAAGTTG13061.1483034827182963No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT11761.0340006858167814No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG8940.7860515417688797No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTCGCTGCGTTCTTCATCGA8880.780776028065733No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTGGCTGCGTTCTTCATCGA8750.7693457483755815No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG8080.7104358453571084No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTTGCTGCGTTCTTCATCGA7830.688454538260663No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT6820.5996500575910246No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT5820.5117248292052439No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA5530.48622651297336744No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTAGCTGCGTTCTTCATCGA4920.4325921236580412No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTGGCTGCGTTCTTCATCGAT4750.41764483483245846No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTCGCTGCGTTCTTCATCGAT4530.3983012845875867No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4140.36401044551713224No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTTGCTGCGTTCTTCATCGAT3870.34027063385297146No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTCGCAAATTA3800.3341158678659668No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT3780.33235736329825116No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTACAAATTA3180.2796022262667827No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2380.20926204355815817No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT2240.19695251158414884No Hit
GCTGCGTTCTTCATCGATGCTCGATCTCGCTAGCTGCGTTCTTCATCGAT2210.19431475473257542No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT2120.18640148417785515No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT2080.18288447504242392No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1620.14243886998496477No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1550.13628410399796012No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGTTG1550.13628410399796012No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1500.1318878425786711No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTGGCTGCGTTCTTCATCGG1460.12837083344323985No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA1460.12837083344323985No Hit
TCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1370.12045756288851961No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG1370.12045756288851961No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTCGCTGCGTTCTTCATCGG1300.11430279690151496No Hit
GCTGCGTTCTTCATCGATGCCTCGATCTCGCTTGCTGCGTTCTTCATCGG1290.11342354461765715No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1290.11342354461765715No Hit
GCTGCGTTCTTCATCGATGCTGCCACCACGTTTAACATCATGCGTTTCGG1270.11166504004994154No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1230.1081480309145103No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCACCGTTTGTAGTTG1210.10638952634679469No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1200.10551027406293688No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC1180.10375176949522127No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCAGTTGCCGAGAGTCG1140.10023476035979004No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)