FastQCFastQC Report
Sun 21 May 2023
EGAF00007832571

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832571
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78945
Sequences flagged as poor quality0
Sequence length247-250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC3037238.47235417062512No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC1160014.69377414655773No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG31493.9888529989233006No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC29763.7697130913927417No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA24463.0983596174551904No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT24103.052758249414149No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC11761.4896446893406803No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT11661.476977642662613No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG11311.4326429792893787No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC9961.261637849135474No Hit
GGAAGTAAAAGTCGTAACAAGTCCACAGGATTTAGTATCTATGGTAGTTG9801.2413705744505668No Hit
GGAAGTAAAAGTCGTAACAAGGAGGATCTTAGCACATGCACATAGAAACA9341.1831021597314586No Hit
GGAAGTAAAAGTCGTAACAAGGTGTCGCAGATTTCCAATGCCTGTTCGCC6850.86769269744759No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC6670.8448920134270695No Hit
GGAAGTAAAAGTCGTAACAAGGGTGTAGAGTATAAGCTTGGAGCCCGTGG5550.703021090632719No Hit
GGAAGTAAAAGTCGTAACAAGGGAGAAAACTGTGAATGTGAGCGAAGAAG5470.6928874532902654No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTGGGTCAGCGGGGTGCCCGACGGTG4360.5522832351637216No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC4310.5459497118246881No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAAGTAGGCCAAGTTGAGCAGGATAT4180.529482551143201No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC3960.5016150484514535No Hit
GGAAGTAAAAGTCGTAACAAGGCTATGTAAAAAATGACGGTAATAATGGT2980.37747799100639684No Hit
GGAAGTAAAAGTCGTAACAAGGCTGTAGGTACCGACCTCACCGTTGATGA2570.3255430996263221No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAGCGTAGCACATGCACATAGAAACA2570.3255430996263221No Hit
GGAAGTAAAAGTCGTAACAAGGCACGGTTGCGCTGTTTTTCCGGCAGCGC2500.3166761669516752No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT2470.3128760529482551No Hit
GGAAGTAAAAGTCGTAACAAGGCGTGGGGTACGTTCGGTGCTGGCCTGCT2460.3116093482804484No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2460.3116093482804484No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA2290.2900753689277345No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2290.2900753689277345No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCGAAGACGTCGAGAAGGAAGCGGC2070.2622078662359871No Hit
GGAAGTAAAAGTCGTAACAAGGGAAGTCGGTGAAAGGCCGGCGCTGTACC1890.23940718221546645No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC1850.23434036354423965No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA1520.1925391095066185No Hit
GGAAGTAAAAGTCGTAACAAGGACAGAGCAACGTATCAGGCGGCGGTGGC1480.18747229083539174No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC1470.18620558616758504No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA1380.1748052441573247No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCGATCAG1340.1697384254860979No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC1320.1672050161504845No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1270.16087149281145102No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGAAGGACTACAGAAAGAAACAGGG1250.1583380834758376No Hit
GGAAGTAAAAGTCGTAACAAGGCGACAACAAATGCAGCGGTGGAACAAGC1200.1520045601368041No Hit
GGAAGTAAAAGTCGTAACAAGGTACAGGGTCTCTGAGTACTCGACCGGGC1180.1494711508011907No Hit
GGAAGTAAAAGTCGTAACAAGGATAGAGACTTGGTACGAGTGCTGGAAGG1140.1444043321299639No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG1130.14313762746215722No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGCGAAGACGTCGAGGAAGAAGCGGC1120.14187092279435048No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT1080.1368041041231237No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC1060.1342706947875103No Hit
GGAAGTAAAAGTCGTAACAAGGAACTGAATGAGGCTTTTGCCGAGTTTAA990.1254037621128634No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC960.1216036481094433No Hit
GGAAGTAAAAGTCGTAACAAGGGCGTGGGGCAGAAGGTGGAAAATGCGCG910.11527012477040978No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC890.11273671543479638No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG870.11020330609918297No Hit
GGAAGTAAAAGTCGTAACAAGGAGAGATCAGCCCTTGCGGCTGGTTTTTG860.10893660143137626No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC850.10766989676356958No Hit
GGAAGTAAAAGTCGTAACAAGGTATGAGAAGAAGAGCCCAGGTGAGGCAA830.10513648742795617No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC820.10386978276014948No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC810.10260307809234277No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACTGAATCCGAAAAGAGCACA800.10133637342453607No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTAGGTGAACCTGCGGAAGGATC800.10133637342453607No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)