FastQCFastQC Report
Sun 21 May 2023
EGAF00007832572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78945
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1616120.47121413642409No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1147314.53290265374628No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1146814.526569130407246No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG31403.977452656913041No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA28663.6303755779340046No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT23913.028690860725822No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT23733.005890176705301No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA11711.4833111660016467No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT11351.4377097979606055No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT10781.3655076318956234No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG9911.2553043257964405No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA6830.8651592881119767No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA6810.8626258787763633No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG6410.8119576920640952No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTCCC5760.7296218886566597No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATCGCCTCGACACTCGGGT5400.6840205206156185No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4660.5902843751979225No Hit
GCTGCGTTCTTCATCGATGCGCCCCCAGGCCTGTTTGACGATCAGGCCGT4650.5890176705301159No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4150.5256824371397808No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG3970.5028817531192603No Hit
GCTGCGTTCTTCATCGATGAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT3910.4952815251124201No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG3600.4560136804104123No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT3270.41421242637279115No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3200.40534549369814427No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA2990.37874469567420355No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2970.37621128633859013No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC2650.33567673696877576No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCACGCCCTCAAGGCCTTCGA2510.3179428716194819No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG2440.309075938944835No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2370.30020900627018815No Hit
GCTGCGTTCTTCATCGATGCCATGGTCCGCTCAAGCTACCATGCCGACGA2300.2913420735955412No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT2100.2660079802394072No Hit
GCTGCGTTCTTCATCGATGCGACGTTCTAAGGTTGTATCGCGCTCCTGAG1870.23687377287985306No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1840.23307365887643297No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1760.22294002153397935No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1650.20900627018810564No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA1600.20267274684907213No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCAGCGCTGCGTTCTTCATCG1600.20267274684907213No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCAGGGCTGCGTTCTTCATCG1380.1748052441573247No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT1320.1672050161504845No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1320.1672050161504845No Hit
GCTGCGTTCTTCATCGATGCCCAGCGTGAGCTGCATGATGATGAGCTTCT1270.16087149281145102No Hit
GCTGCGTTCTTCATCGATGCCGACGCCGAGGCGTTCAACCACCAGGTTCC1240.15707137880803093No Hit
GCTGCGTTCTTCATCGATCTGAAAGAGCTCGGGATGCGCCCAGGCATCCG1210.15327126480461079No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCACGGCTGCGTTCTTCATCG1200.1520045601368041No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC1180.1494711508011907No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCACCGCTGCGTTCTTCATCG1170.14820444613338402No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1170.14820444613338402No Hit
GCTGCGTTCTTCATCGATGCAGAGCCTGACATCGCGCGGGCAGATCATCC1160.1469377414655773No Hit
GCTGCGTTCTTCATCGATGCGACCGAACTCGATCTCTTCCAGCTCTTCCT1130.14313762746215722No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGTCGTCT1080.1368041041231237No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1080.1368041041231237No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1070.13553739945531698No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1030.1304705807840902No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCACTGCTGCGTTCTTCATCG1030.1304705807840902No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1030.1304705807840902No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAATCCACTGCTGCCG1020.1292038761162835No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1010.12793717144847677No Hit
GCTGCGTTCTTCATCGATGCGGGGATATCCAGAATCGCCCAATGCCACCA1000.12667046678067007No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT970.12287035277724997No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCATCGCTGCGTTCTTCATCG970.12287035277724997No Hit
GCTGCGTTCTTCATCGATGCTAGTTGGCGGGTGAATACTGTAATGTCTTC970.12287035277724997No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT950.12033694344163659No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC940.11907023877382988No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCAGTGCTGCGTTCTTCATCG940.11907023877382988No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCATGGCTGCGTTCTTCATCG910.11527012477040978No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCATTCGTCCCGATGA900.11400342010260307No Hit
GCTGCGTTCTTCATCGATGGCTTGTTTTGCCGCTGGCTTCGCTTGGGCTG860.10893660143137626No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACTAATGTGT860.10893660143137626No Hit
GCTGCGTTCTTCATCGATGCGTTGTCGTTTTGTTTTCAAGAAACTGGACA850.10766989676356958No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA850.10766989676356958No Hit
GCTGCGTTCTTCATCGATATGTTTGGGTAAAGGTAACTGAACCAAAATCC810.10260307809234277No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT800.10133637342453607No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG800.10133637342453607No Hit
GCTGCGTTCTTCATCGATGCGTGGCTTCACCAACGCTGCGTTCTTCATCG790.10006966875672936No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)