FastQCFastQC Report
Sun 21 May 2023
EGAF00007832573

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832573
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80805
Sequences flagged as poor quality0
Sequence length247-250
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1675020.72891528989543No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC970612.011632943505973No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA80149.91770311243116No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG66368.212363096343047No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA57547.120846482272136No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC28723.554235505228637No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA26773.3129138048388094No Hit
GGAAGTAAAAGTCGTAACAACAGGAGAGCGTCAGCCAATCGACGCAATCG24933.0852051234453315No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAATAATGAAGAATCAG23162.8661592723222573No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG20892.5852360621248685No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA15091.8674586968628177No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC13191.6323247323804218No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC11531.4268919002536973No Hit
GGAAGTAAAAGTCGTAACAAGGCGGAGTTGCACAAACTCTTTTTTGATTT6750.8353443475032486No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGTTTACAATGCCATCATCGCCCATC4210.5210073634057298No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT3800.4702679289647918No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3680.45541736278695627No Hit
GGAAGTAAAAGTCGTAACAAGGCAACGACGAGCACGATGCCGAGGATTTT3600.44551698533506595No Hit
GGAAGTAAAAGTCGTAACAAGGAAGTAATGACGCAGGCCTTCGTGGCGCA3540.43809170224614813No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCAGCCGCAGTGGAATCCGTTGTGCG2850.35270094672359387No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG2570.31804962564197764No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC2430.3007239651011695No Hit
GGAAGTAAAAGTCGTAACAAGGGATTTATGATTTGGGTAGACCTACGCGA2300.2846358517418477No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT2270.28092321019738875No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACGATTAGCACTTGAC2080.25740981374914923No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC1980.24503434193428622No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAAAGGACCGGAATCTGCTTCATACG1960.24255924757131367No Hit
GGAAGTAAAAGTCGTAACAAGGTTGGCGGGATTTACACAGTTCTTTCGAC1930.23884660602685476No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG1900.2351339644823959No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGCAGATTTCCAATGCCTGTTCGCC1900.2351339644823959No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1840.22770868139347814No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC1820.22523358703050553No Hit
GGAAGTAAAAGTCGTAACAAGGACGCACATCATGATGCTCAGGAAGCTGG1800.22275849266753298No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG1770.21904585112307406No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAC1640.20295773776375223No Hit
GGAAGTAAAAGTCGTAACAAGGGCGTGGGGCAGAAGGTGGAACATGCGCG1630.20172019058226598No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACTGAATCCGAAAAGAGCACA1610.19924509621929337No Hit
GGAAGTAAAAGTCGTAACAAGGATGTTGCGTCAAGGTTTCGGATAAAGCA1590.19677000185632076No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGCAGATTTCCAGTGCCTGTTCGCC1550.1918198131303756No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTTACCGACA1550.1918198131303756No Hit
GGAAGTAAAAGTCGTAACAAGGTTAAGAGAGGGCCGTTTTCCTTATTAGG1540.1905822659488893No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA1530.189344718767403No Hit
GGAAGTAAAAGTCGTAACAAGGGGCTGAGCGAGAGCATGGACACGGTCAC1420.17573169977105377No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC1180.1460305674153827No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA1030.1274673596930883No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA1030.1274673596930883No Hit
GGAAGTAAAAGTCGTAACAAGGCGTTGATGGGGAACATATGCCAATCGCC990.12251717096714311No Hit
GGAAGTAAAAGTCGTAACAATGCGCTACATCATTGCCTTGGAACCCCTGG960.11880452942268423No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC910.11261679351525276No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)