FastQCFastQC Report
Sun 21 May 2023
EGAF00007832574

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832574
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences80805
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1023512.66629540251222No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG935911.582204071530228No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT74409.20735103025803No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG65338.08489573664996No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC52796.5330115710661465No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT41395.1222077841717715No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG38104.715054761462781No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA27443.3958294659983914No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC25673.1767836148753172No Hit
GCTGCGTTCTTCATCGATGCTGTCGTGGTGACGGTGGCCGCGGCGCTGGG24132.9862013489264276No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT19812.451580966524349No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG16832.0827919064414333No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT15811.9565620939298312No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA13551.6768764309139286No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT7490.9269228389332343No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGATG5210.6447620815543593No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCATAGCCAAGTAGCAG5200.6435245343728729No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGGC4980.6162984963801745No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA4830.5977352886578801No Hit
GCTGCGTTCTTCATCGATGCTAGTTGGCGGGTGAATACTGTAATGTCTTC4590.568034156302209No Hit
GCTGCGTTCTTCATCGATGCCATGAACCGTTTGCGCTACGATAGCAGGCT4360.5395705711280243No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT3590.4442794381535796No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3230.39972773962007296No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3080.3811645318977786No Hit
GCTGCGTTCTTCATCGATGCCGAGCATGCTTTTGACCCGATTTACGCCCG2950.3650764185384568No Hit
GCTGCGTTCTTCATCGATGCACGCGGCGCTCGAGGCGGGTCAGCCGATGT2930.3626013241754842No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG2790.3452756636346761No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA2580.3192871728234639No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT2240.2772105686529299No Hit
GCTGCGTTCTTCATCGATGCCGTTCAGGTAGCAGGAAAGCTTCCTATTCA2040.252459625023204No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1970.24379679475279992No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAATCCACTGCTGCCG1920.23760905884536845No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT1880.2326588701194233No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT1880.2326588701194233No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC1860.2301837757564507No Hit
GCTGCGTTCTTCATCGATGCGCTGTCGGTAAGCTGCGTTCTTCATCGATG1820.22523358703050553No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1680.20790792648969744No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1680.20790792648969744No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTGCCG1610.19924509621929337No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTGTGGCTCCTTCGTCCCGATGC1610.19924509621929337No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTGGTCATTTACTACAAACAAATTTC1550.1918198131303756No Hit
GCTGCGTTCTTCATCGATGCCCTGGTCCCCGACGCACGCGCCTTTCGTCT1380.17078151104510858No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1220.1509807561413279No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCCTT1220.1509807561413279No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1210.14974320895984158No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1200.1485056617783553No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTCGAAAGTTG1170.14479302023389642No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT920.11385434069673907No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT920.11385434069673907No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT860.1064290576078213No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC820.10147886888187611No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)