FastQCFastQC Report
Sun 21 May 2023
EGAF00007832584

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832584
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129078
Sequences flagged as poor quality0
Sequence length235-238
%GC43

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT6392049.5204450022467No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT87666.791242504532144No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT53194.120764189094966No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT41623.2244069477370276No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGACGCTGCGTTCTTCATCGA24461.8949782302173879No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT24361.8872309766187887No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT17291.3395001471978185No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAGGCTGCGTTCTTCATCGA16661.290692449526643No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG15171.1752583709075133No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT13671.0590495669285238No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT13311.0311594539735665No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGACGCTGCGTTCTTCATCGAT13111.0156649467763676No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA12740.9870001084615504No Hit
GCTGCGTTCTTCATCGATGCTGTCGTGGTGACGGTGGCCGCGGCGCTGGG11920.9234726289530362No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGATGCTGCGTTCTTCATCGA11190.8669176776832612No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG10220.791769317776848No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGAGGCTGCGTTCTTCATCGAT8150.6314011682858427No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAAGCTGCGTTCTTCATCGA6990.5415330265420909No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC6610.5120934628674135No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG6580.5097692867878337No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG6380.4942747795906351No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT5310.4113791660856227No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGATGCTGCGTTCTTCATCGAT5000.3873626799299648No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT4800.37186817273276623No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT4270.33080772866019No Hit
GCTGCGTTCTTCATCGATGCACTGATCTCGCAGATGAGCGAGCAGCCCAT3940.3052417917848123No Hit
GCTGCGTTCTTCATCGATGCACGCATGAGGAAGCTGCGTTCTTCATCGAT3830.29671981282635307No Hit
GCTGCGTTCTTCATCGATGCCGCAATGGTAGGGCATTTAGGCTCAGCAGC3780.29284618602705337No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG3330.2579835448333566No Hit
GCTGCGTTCTTCATCGATGCGGATGTAGGAGCCGTCGGGACGACGAACTT2800.2169231007607803No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT2710.20995057252204097No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT2670.20685167108260122No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2460.19058243852554269No Hit
GCTGCGTTCTTCATCGATGCTTAAAATATATTCCGGATGAGCAGGAATCT2450.18980771316568276No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2450.18980771316568276No Hit
GCTGCGTTCTTCATCAACGCATGAGGACGCTGCGTTCTTCATCAACGCAT2410.18670881172624304No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG2390.1851593610065232No Hit
GCTGCGTTCTTCATCGATGCGGAACTTCGCGGACTCAATGCGCGCCTGCA2380.18438463564666327No Hit
GCTGCGTTCTTCATCGATGCGAATGTAGGAGCCGTCGGGACGACGAACTT2260.1750879313283441No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT2190.1696648538093246No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT2140.16579122701002497No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1990.154170346612126No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG1990.154170346612126No Hit
GCTGCGTTCTTCATCGATGCAACGCATGAGGAGGCTGCGTTCTTCATCGG1970.15262089589240616No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1890.14642309301352668No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1860.1440989169339469No Hit
GCTGCGTTCTTCATCGAAACGCATGAGGACGCTGCGTTCTTCATCGAAAC1820.1410000154945072No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1750.13557693797548767No Hit
GCTGCGTTCTTCATCGATAACGCATGAGGACGCTGCGTTCTTCATCGATA1670.12937913509660826No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC1630.12628023365716853No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCC1610.12473078293744866No Hit
GCTGCGTTCTTCATCGATGCTGTCTTAACGATTTCACCTGTCATGGAGTC1540.11930770541842917No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1530.11853298005856923No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC1410.10923627574025009No Hit
GCTGCGTTCTTCATCGATGCTCAGGGAAACAGTCTGAGAACTCTAGAGTT1390.10768682502053022No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1370.10613737430081036No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG1340.10381319822123057No Hit
GCTGCGTTCTTCATCGATGCCTGGGTTCCCGTCAACACCAGGAACATCGC1320.10226374750151072No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTA1320.10226374750151072No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)