FastQCFastQC Report
Sun 21 May 2023
EGAF00007832588

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832588
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences97286
Sequences flagged as poor quality0
Sequence length237-238
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT2212622.743251855354316No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1265113.003926567029172No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA90059.256213638139094No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG68297.019509487490493No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCGAT46034.731410480439117No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA41454.260633595789733No Hit
GCTGCGTTCTTCATCGATGCACCTTTCAATCTTAAATACTACAAAAAGGG36573.7590197972986865No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT29613.043603396172111No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA28712.951092654647123No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG18061.856382213268096No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT16171.662109656065621No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT13511.388689020002878No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCGGC7340.7544764919926813No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG6540.6722447217482475No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT5910.6074872026807557No Hit
GCTGCGTTCTTCATCGATGCCGGTAACGTCTGGCTCCTTCGTCCCGATGC5860.6023477170404786No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT5310.5458133749974303No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTGCCG4960.5098369755154905No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC4800.49339062146660356No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA3850.39574039430133834No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGGCGAATGGTAAAGGGGATGT3830.39368460004522743No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTCCTTTGCGAT3690.3792940402524515No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA3570.36695927471578643No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3490.358736097691343No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3490.358736097691343No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCTGC3290.3381781551302346No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG3140.3227596982094032No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC2970.30528544703246097No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2890.2970622700080176No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC2800.2878111958555188No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT2720.27958801883107537No Hit
GCTGCGTTCTTCATCGATGCGCTCCTCGGAGGAGAGGTGGCGGATGTAGC2630.27033694467857655No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT2530.26005797339802234No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC2490.2559463848858006No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT2480.2549184877577452No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2390.24566741360524638No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA2390.24566741360524638No Hit
GCTGCGTTCTTCATCGATGCCTTTCGCCGACAAACAGCTAACGTAGATAT2050.21071891125136197No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA1960.20146783709886315No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1920.19735624858664147No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCCTT1830.18810517443414262No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA1730.17782620315358838No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT1720.17679830602553298No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG1600.16446354048886788No Hit
GCTGCGTTCTTCATCGATGCCGAATACTTACGGCGCAGACAGGACACCCA1580.16240774623275703No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1550.15932405484859077No Hit
GCTGCGTTCTTCATCGATGCAATGAGCGGAGAAACGACAATCGCCGTTCC1510.15521246633636906No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1410.14493349505581482No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1380.14184980367164854No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1330.13671031803137143No Hit
GCTGCGTTCTTCATCGATGTTACGTATTCGGCTGCGTTCTTCATCGATGT1290.13259872951914972No Hit
GCTGCGTTCTTCATCGATGCCCTGTGGGTACTTGCCAGCCAAATGAAGAC1260.12951503813498344No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1250.12848714100692804No Hit
GCTGCGTTCTTCATCGATGCCGACAAACCGCCTACGCCGAAATATTTTGA1230.12643134675081716No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1220.12540344962276176No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1180.12129186111054005No Hit
GCTGCGTTCTTCATCGATGGTTACGTATTCGGCTGCGTTCTTCATCGATG1120.11512447834220751No Hit
GCTGCGTTCTTCATCGATGCGCTGATCTCGCAGATGAGCGAGCAGCCCAT1010.10381760993359784No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG990.101761815677487No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)