FastQCFastQC Report
Sun 21 May 2023
EGAF00007832593

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832593
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78877
Sequences flagged as poor quality0
Sequence length247-250
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC2799335.48943291453783No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC1100213.948299250732152No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC1042313.214244963677624No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC32394.106393498738542No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG27593.4978510846000734No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA13551.7178645232450522No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC13011.6494035016544746No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC11821.4985356948159794No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA11661.4782509476780303No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC9721.2322983886303993No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC9591.2158170315808157No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC9541.2094780481002065No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT8901.1283390595484108No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA8721.105518719018218No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGAATGAGGCTTTTGCCGAGTTTAA7650.9698644725331846No Hit
GGAAGTAAAAGTCGTAACAAGGACTACAGAAAGAAACAGGGTCACAGACA5930.7518034408002333No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC5730.726447506877797No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG3670.4652813874767042No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT3480.4411932502503898No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG2400.3042712070692344No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA2300.2915932401080163No Hit
GGAAGTAAAAGTCGTAACAAGGCTGTAGGTACCGACCTCACCGTTGATGA2000.253559339224362No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCCGTATCTCA1930.24468476235150932No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA1780.22566781190968216No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1710.21679323503682948No Hit
GGAAGTAAAAGTCGTAACAAGGATTTGGCCAGCAGGGAAGGAAGGTTCAG1610.2041152680756114No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGAAGGTTTGGTACACGTTTCCGAA1530.1939728945066369No Hit
GGAAGTAAAAGTCGTAACAAGCACACAATGAACTTACTAATAGTTCAATC1430.18129492754541882No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC1380.17495594406480977No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC1280.16227797710359168No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCGATAGCTGCAGGTTTCCA1280.16227797710359168No Hit
GGAAGTAAAAGTCGTAACAAGGCGGAGTTGCACAAACTCTTTTTTGATTT1160.14706441675012993No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGAATACGACGAGAGGCGACATCCT1150.14579662005400815No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1120.1419932299656427No Hit
GGAAGTAAAAGTCGTAACAGGCGTTAAGTTTACAGCATGAAGAGAACAAA1090.13818983987727726No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT960.12170848282769375No Hit
GGAAGTAAAAGTCGTAACAAGGACGGCATCATTGGTTACGTTCTTGCAAT940.11917288943545012No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC940.11917288943545012No Hit
GGAAGTAAAAGTCGTAACAAGGACAGAGCAACGTATCAGGCGGCGGTGGC910.11536949934708471No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCAGCCGCAGTGGAATCCGTTGTGCG850.10776271917035385No Hit
GGAAGTAAAAGTCGTAACAAGGGGCGTAAGTTCAAAGTCAATATCGTCTA840.10649492247423203No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTAAACTGAATCCGAAAAGAGCACA800.10142373568974479No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC790.10015593899362298No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)