FastQCFastQC Report
Sun 21 May 2023
EGAF00007832594

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832594
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences78877
Sequences flagged as poor quality0
Sequence length236-238
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1807822.919228672490082No Hit
GCTGCGTTCTTCATCGATGCTCCATGTTATATGGATTTCATAACTAATAC1128514.307085715734624No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1035013.121695804860734No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG48586.158956349759753No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGAT43825.555485122405771No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG26763.392623958821963No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG25703.2582375090330515No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGATG25263.2024544544036924No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT13011.6494035016544746No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA12711.6113696007708203No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGGC11801.4960001014237356No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC8521.080162785095782No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT7810.9901492196711336No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT7500.9508475220913575No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGGCT6920.8773153137162923No Hit
GCTGCGTTCTTCATCGATTTCCAGGATCATGACTTCAACTTCATCACCCA6650.8430848029210036No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5460.6922169960825082No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC5260.666861062160072No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC4630.586989870304398No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT3460.43865765685814617No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2950.3740000253559339No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA2330.2953966301963817No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCCTT1980.2510237458321184No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1880.23834577887090025No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1820.23073899869416942No Hit
GCTGCGTTCTTCATCGATGCGCCCAAACTGCACCTCAGTACCCTGCAAGA1670.21172204825234225No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT1640.20791865816397684No Hit
GCTGCGTTCTTCATCGATGCGAGAACCACGAGATCCGTTGTTGAAAGTTT1370.17368814736868796No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT1350.17115255397644435No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCTTT1280.16227797710359168No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCCTTG1230.1559389936229826No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1230.1559389936229826No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT1090.13818983987727726No Hit
GCTGCGTTCTTCATCGATGCGCCGTCATTGACGAATTGCACTTCGGCAGT1090.13818983987727726No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1050.13311865309279003No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1020.1293152630044246No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG960.12170848282769375No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC930.11790509273932831No Hit
GCTGCGTTCTTCATCGATGTGTTTTGGCAATGGCAACTGGACTAAGATTC910.11536949934708471No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT910.11536949934708471No Hit
GCTGCGTTCTTCATCGATTTCCAGAATCATAACTTCGACTTCGTCGCCCA910.11536949934708471No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCTGC870.11029831256259745No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG870.11029831256259745No Hit
GCTGCGTTCTTCATCGATGCACTCAACAGTTGGCAACTTGTCAAGGAGCT820.10395932908198842No Hit
GCTGCGTTCTTCATCGATGCTATCAAATACCTGACCAGGGCTTAATTTGC810.1026915323858666No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCTTTT790.10015593899362298No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG790.10015593899362298No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)