FastQCFastQC Report
Sun 21 May 2023
EGAF00007832600

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832600
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences161857
Sequences flagged as poor quality0
Sequence length237-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3950924.409818543529166No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGAT3068018.95500349073565No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT148769.190828941596594No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG135598.377147729168339No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT95635.908301772552315No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGATG46212.8549892806613246No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT42232.609093211909278No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC38442.3749359002082087No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG37012.286586307666644No Hit
GCTGCGTTCTTCATCGATGCACAATGCAAAATCATCACAACGTGCGCTCA33212.0518111666471017No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGGC23121.4284213843083708No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT22741.4049438702064168No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT10380.641306832574433No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCCTT8840.5461611175296712No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT8740.5399828243449465No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT8100.5004417479627078No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC5440.33609914924902845No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT4550.28111233990497786No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGGA4540.2804945105865054No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT4510.2786410226310879No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4270.26381311898774845No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCGCC3990.24651389807051902No Hit
GCTGCGTTCTTCATCGATGCTGGTCAGACGAGCTGCGTTCTTCATCGGCT3720.2298325064717621No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG3500.2162402614653676No Hit
GCTGCGTTCTTCATCGATGCCTGGCAAACAAAGGAACAACACACACGTGT3410.21067979759911526No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA3170.1958518939557758No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA2570.15878213484742706No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG2500.1544573296181197No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2460.1519860123442298No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT2370.14642554847797748No Hit
GCTGCGTTCTTCATCGATGCCATAAAGCGCCTTTCGGGACGGGTTCCGAT2350.1451898898410325No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT2270.1402472552932527No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2230.13777593801936278No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT2200.13592245006394532No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT2040.12603718096838568No Hit
GCTGCGTTCTTCATCGATGCCTTTTCCGAGGCCGGACGATCGGGCAAACT1980.12233020505755081No Hit
GCTGCGTTCTTCATCGATGCATCTGAGAATTTCTCGGCTTCTACGGGAGC1970.12171237573907832No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT1870.11553408255435353No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1730.10688447209573884No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCTAGGCCGGACGATCGGGCAAACT1680.10379532550337645No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTGC1650.10194183754795899No Hit
GCTGCGTTCTTCATCGATGCGGTCAGACGAGCTGCGTTCTTCATCGATGC1640.10132400822948652No Hit
GCTGCGTTCTTCATCGATGCCTGGTCAGACGAGCTGCGTTCTTCATCTTT1630.10070617891101404No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)