FastQCFastQC Report
Sun 21 May 2023
EGAF00007832601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70583
Sequences flagged as poor quality0
Sequence length247-250
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA3736752.94050975447345No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1488421.08723063627219No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC22883.241573750053129No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC14272.0217332785514923No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC12551.778048538599946No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC8091.1461683408186107No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC7381.0455775470014026No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT5390.7636399699644391No Hit
GGAAGTAAAAGTCGTAACAAGCACACAATGAACTTACTAATAGTTCAATC4860.688551067537509No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA3690.5227887735007013No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC3360.4760353059518581No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGAA3070.4349489253786322No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG3050.4321153818908236No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC3040.4306986101469192No Hit
GGAAGTAAAAGTCGTAACAAGGAATTGACTGGAGGAAGATGGATAATAGA2700.3825283708541717No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTAAAGGCGTTCAACGCCCTCACGGC2600.3683606534151283No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGAAACCTCTCCGGCA2200.3116897836589547No Hit
GGAAGTAAAAGTCGTAACAAGGCTACGGAAAAGAAAGTTTTGGTGGGCAA2160.30602269668333737No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG2130.3017723814516243No Hit
GGAAGTAAAAGTCGTAACAAGGATAGAGACTTGGTATGAGTGCTGGAAGG2110.29893883796381565No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC1910.27060340308572883No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1840.2606860008783985No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGAATACGACGAGAGGCGACATCCT1730.24510151169545077No Hit
GGAAGTAAAAGTCGTAACATGAGTGCAGGCTTCCAGGAACTGGCAACAGG1650.233767337744216No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTATCCGGCA1510.21393253332955528No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACATCTCCGGCA1420.20118158763441624No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACAACTCTCCGGCA1330.18843064193927717No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAACACA1190.1685958375246164No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC1170.16576229403680773No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTACGGCA1090.154428120085573No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC1040.14734426136605133No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGCGCCTGAGATGGGTAAACAAGAGG1020.14451071787824263No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC950.13459331567091226No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC840.11900882648796453No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCAGGCA740.10484110904892113No Hit
GGAAGTAAAAGTCGTAACAAGGGGCAATGAAAACACGATTTTGGTTGAAG740.10484110904892113No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCTATCGCAGCAGGTTTCCG740.10484110904892113No Hit
GGAAGTAAAAGTCGTAACAAGGGGCGTAAGTTCAAAGTCAATATCGTCTA720.10200756556111244No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)