FastQCFastQC Report
Sun 21 May 2023
EGAF00007832610

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832610
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71253
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3584250.30244340589169No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT726210.191851571161916No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG40115.629236663719422No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG17512.4574403884748715No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG15842.223064292029809No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG13811.9381640071295243No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTACGCTGCGTTCTTCATCGA12081.695367212608592No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAGGCTGCGTTCTTCATCGA11691.6406326751154339No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTATGCTGCGTTCTTCATCGA11331.5901084866602109No Hit
GCTGCGTTCTTCATCGATGCTAGGCTTTTTACTTCTTCTTTTGCTTCAGC9971.399239330273813No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT9551.3402944437427198No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG8801.2350357177943385No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAGGCTGCGTTCTTCATCGG6020.8448767069456724No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAAGCTGCGTTCTTCATCGA5570.7817214713766438No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTATGCTGCGTTCTTCATCGG4760.6680420473523921No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTACGCTGCGTTCTTCATCGG4330.607693711141987No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3220.45191079673838297No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3200.4491038973797595No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3120.4378762999452655No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT3100.43506940058664195No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG2690.3775279637348603No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC2490.3494589701486253No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAAGCTGCGTTCTTCATCGG2290.3213899765623903No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2250.3157761778451434No Hit
GCTGCGTTCTTCATCGATGCCGTAAGACCATAACTCCCTAGCCTCTTCGT2050.2877071842589084No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT2050.2877071842589084No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1910.2680588887485439No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1610.22595539836919148No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1550.21753470029332098No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC1480.20771055253813875No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCATAGCCAAGTAGCAG1440.20209675382089173No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1210.16981741119672156No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1210.16981741119672156No Hit
TCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1190.16701051183809804No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG960.13473116921392783No Hit
GCTGCGTTCTTCATCGATGCACCTGAGCCAATTTTTGGCTTGGCGGTAAC900.12631047113805735No Hit
GCTGCGTTCTTCATCGATTCCGTTTCCGAGGCCGGACGATCGGGCAAACT880.12350357177943386No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCTAGGCCGGACGATCGGGCAAACT820.11508287370356335No Hit
GCTGCGTTCTTCATCGATGTCGTTTCCGAGGCCGGACGATCGGGCAAACT760.10666217562769287No Hit
GCTGCGTTCTTCATCGATGCGTCGAGCTCCTAGGCTGCGTTCTTCATCCT750.10525872594838112No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT720.10104837691044587No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)