FastQCFastQC Report
Sun 21 May 2023
EGAF00007832620

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832620
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59977
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1265321.096420294446204No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1133318.895576637711123No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1021517.03152875268853No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA44107.352818580455842No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA18063.0111542758057253No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG15462.5776547676609365No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC15332.555979792253697No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG11491.9157343648398555No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA10791.7990229588008735No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG10111.6856461643630059No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT8901.4839021624956232No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT7521.2538139620187738No Hit
GCTGCGTTCTTCATCGATGCCTCATCATAGTCGCCATAACCATGAAGGCT5840.973706587525218No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACGATGTAGGAACGCCCGCGCT4900.8169798422728712No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT4440.7402837754472548No Hit
GCTGCGTTCTTCATCGATGCCAAATATACCGCCGTATCTATACTCCCCCC3590.59856278239992No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3390.5652166663887823No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT2670.445170648748687No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC2400.4001533921336512No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2050.3417976891141604No Hit
GCTGCGTTCTTCATCGATGCCCACCAAGCGCCCCCGTGGGGAAAGGCGAT1850.30845157310302285No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1490.24842856428297513No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGGGCTGCGTTCTTCATCGA1380.23008820047684944No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1360.2267535888757357No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1230.20507861346849626No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA1210.20174400186738248No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGCGCTGCGTTCTTCATCGA1180.19674208446571187No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT1130.18840555546292745No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1080.18006902646014306No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1080.18006902646014306No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA950.1583940510529036No Hit
GCTGCGTTCTTCATCGATGCTGCCCACGGTTTGGGCATACGCGTACTGCT880.14672291044900546No Hit
GCTGCGTTCTTCATCGATGCGAATAACTACGACGAAGAGGGCAAGGTTAC880.14672291044900546No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT870.14505560464844858No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG860.14338829884789167No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC860.14338829884789167No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG840.14005368724677794No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT830.13838638144622106No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT830.13838638144622106No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT800.13338446404455043No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA770.12838254664287976No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT750.125047935041766No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA700.11671140603898161No Hit
GCTGCGTTCTTCATCGATGCAACCAACCTTGGTGCTGCGTTCTTCATCGA670.11170948863731098No Hit
GCTGCGTTCTTCATCGATGCCCACCATCACCACCAAATCCTTTCGGCCCT660.11004218283675408No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT630.10504026543508346No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG630.10504026543508346No Hit
GCTGCGTTCTTCATCGATGCGAGGTTGTTGAATGCGCGAGCGTCAGAAGG600.1000383480334128No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)