FastQCFastQC Report
Sun 21 May 2023
EGAF00007832624

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832624
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences103132
Sequences flagged as poor quality0
Sequence length237-238
%GC57

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3613135.03374316410038No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2448423.74044913314975No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1053010.210216033820736No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT37193.6060582554396308No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA36763.564364115890315No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT29632.873017104293527No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG27302.6470930458053754No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGATG16291.5795291471124386No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGAT14711.426327425047512No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT11821.1461040220300196No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT8580.8319435286816895No Hit
GCTGCGTTCTTCATCGATGCCGTTCTTTCCGACAAGGGACAGGCGGTGCT5020.48675483845945006No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG4670.4528177481286119No Hit
GCTGCGTTCTTCATCGATGCCTAACCTGGAAGCTGCGTTCTTCATCGGCT4100.3975487724469612No Hit
GCTGCGTTCTTCATCGATGCCCTAACCTGGAAGCTGCGTTCTTCATCGGC3790.36749020672536165No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA2990.28991971454058874No Hit
GCTGCGTTCTTCATCGATGCGCTGATCTCGCAGATGAGCGAGCAGCCCAT2440.23659000116355738No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT2120.20556180428964824No Hit
GCTGCGTTCTTCATCGATGCCTTGAAGTCCGTCTGCTTGTGGTCGACATT1940.18810844354807432No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1920.186169181243455No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1770.17162471395881007No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1760.1706550828065004No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1750.16968545165419074No Hit
GCTGCGTTCTTCATCGATGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA1680.1628980335880231No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGATGCCGGACGATCGGGCAAACT1600.15514098436954582No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1550.15029282860799753No Hit
GCTGCGTTCTTCATCGATGCGCGTGATGCGCGTGATGTGGTCGGTGTGGT1470.14253577938952022No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1340.12993057440949463No Hit
GCTGCGTTCTTCATCGATGCCGTTCAGGTAGCAGGAAAGCTTCCTATTCA1310.12702168095256564No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT1250.12120389403870767No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG1230.11926463173408836No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT1200.11635573827715937No Hit
GCTGCGTTCTTCATCGATGCATTGGCCCGAATTCGGCGGTCACGTCGTAG1200.11635573827715937No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT1170.11344684482023039No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1070.10375053329713378No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1060.10278090214482412No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)