FastQCFastQC Report
Sun 21 May 2023
EGAF00007832628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences175463
Sequences flagged as poor quality0
Sequence length235-238
%GC54

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG7567143.126471107868895No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2635315.019120840291114No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT2568814.64012355881297No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG72724.144463505126437No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG40832.326986316203416No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT37652.1457515259627384No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT29251.6670181177798167No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA27381.560442942386714No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA22651.290870439921807No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT7170.40863315912756537No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT6280.35791021468913675No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC6210.3539207696209457No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC5440.31003687387084455No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG4390.25019519784797933No Hit
GCTGCGTTCTTCATCGATGCCGTTGTCGACCGCTTCGCGGATCAGGTGGT3850.21941947875050583No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT3580.20403161920176904No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA3500.19947225340955074No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG3340.19035352182511414No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG3210.1829445524127594No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3160.18009494879262294No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT2840.16185748562374974No Hit
GCTGCGTTCTTCATCGATGCGAGAGTCGAGATATCCGTTGCCGAGAGTCG2820.16071764417569517No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCCGCGGCGCTGGG2580.14703954679904024No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG2470.1407704188347401No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2460.14020049811071278No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA2450.13963057738668552No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG2380.1356411323184945No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2360.13450129087043994No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATTCGTTGCCGAGAGTCG2290.13051184580224892No Hit
TCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG2230.1270923214580852No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2220.1265224007340579No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG2210.1259524800100306No Hit
GCTGCGTTCTTCATCGATGCGGATTATCGGGGAGAAATCGGCGTAATCTT2200.1253825592860033No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG2120.12082319349378502No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC2090.11911343132170314No Hit
GCTGCGTTCTTCATCGATGCCTACAATCTGAGAAAGAGGGAGCTTGTGCG1860.10600525466907552No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1850.10543533394504825No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCATTGCCGAGAGTCG1850.10543533394504825No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT1810.10315565104893909No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)