FastQCFastQC Report
Sun 21 May 2023
EGAF00007832629

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832629
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66711
Sequences flagged as poor quality0
Sequence length247-250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5673485.04444544377988No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACTTGCGGAAGGATC6520.9773500622086312No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC5440.8154577206157905No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT4670.7000344770727467No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC3670.5501341607830792No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG3470.5201540975251457No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC3430.5141580848735591No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG3430.5141580848735591No Hit
GGAAGTAAAAGTCGTAACAAGGTATCGGTAGGTGAACCTGCCGATGGATC1770.2653235598327113No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1710.2563295408553312No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC1620.24283851238926113No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1490.2233514712716044No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC1460.21885446178291434No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCGGAAGGATC1460.21885446178291434No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCTGAAGGATC1400.20986044280553434No Hit
GGAAGTAAAAGTCGTAACAAGGGATAAAAGTTGTAGGAAGAGCAACAAAG1400.20986044280553434No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGGAAACAGAATCCGAAAAGAGCACA1340.20086642382815428No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA1270.19037340168787756No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTATGTGAACCTGCGGAAGGATC1200.17988037954760086No Hit
GGAAGTAAAAGTCGTAACAAGGGAACCGCTTTTACGCAGGAGGAGCGCCA1190.1783813763847042No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGTGGAAGGATC1160.17388436689601416No Hit
GGAAGTAAAAGTCGTAACAAGTGGCAAGAAGAATACGATTAGCACTTGAC1160.17388436689601416No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT1060.1588943352670474No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCAGCGGAAGGATC1050.15739533210415074No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC1020.1528983226154607No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC1010.15139931945256405No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGAAAGGATC980.14690230996387402No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCGGTAGGTGAACCTGCGGAAGGATC980.14690230996387402No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC850.12741526884621726No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA850.12741526884621726No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCTTAGGTGAACCTGCGGAAGGATC850.12741526884621726No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGATAAGGAGAATCACGATGAGCCTA830.12441726252042393No Hit
GGAAGTAAAAGTCGTAACAAGGATGGGAATTACGACGGCCGCTATGCGTG830.12441726252042393No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC820.12291825935752723No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC750.11242523721725053No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGTAAGGATC720.1079282277285605No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC710.10642922456566384No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)