FastQCFastQC Report
Sun 21 May 2023
EGAF00007832630

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832630
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66711
Sequences flagged as poor quality0
Sequence length235-238
%GC53

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3730355.91731498553462No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1336120.028181259462457No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG42666.394747492917211No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4730.7090284960501266No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4360.6535653790229498No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA3810.5711202050636327No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3680.551633163945976No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG3280.49167303743010893No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT3210.48118001528983223No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTTG2380.3567627527694084No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT2310.34626973062913163No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA2260.33877471481464827No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG2210.3312796990001649No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG2110.3162896673711982No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATTCGTTGCCGAGAGTCG2090.3132916610454048No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1920.2878086072761613No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGATATCCGTTGTTAAGAGTCG1790.2683215661585046No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1680.2518325313666412No Hit
TCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1510.22634947759739774No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1470.220353464945811No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG1320.19786841750236095No Hit
GCTGCGTTCTTCATCGATGCCTTCCTGAACGTGGACAAAGGATTGGTCAA1250.18737539536208422No Hit
GCTGCGTTCTTCATCGCTGATGCCATTTGCTGTGCAGCCTAATTCCTGTA1170.17538337005891083No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1170.17538337005891083No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATACGTTGCCGAGAGTCG1120.16788835424442747No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTGGTCATTTACTACAAACAAATTTC1090.16339134475573744No Hit
GCTGCGTTCTTCATCGAGGTCTCAAGGTCCTCAGGACGATCGGCGGAGAG1080.16189234159284077No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1050.15739533210415074No Hit
GCTGCGTTCTTCATCGATGTCTTCCTTTGTAGCATCAGCTGGGAAGGTCA1020.1528983226154607No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG1010.15139931945256405No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG960.14390430363808066No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA930.13940729414939065No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT930.13940729414939065No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGATAGTCG900.13491028466070062No Hit
GCTGCGTTCTTCATCGATGCAATCGGTGGGGTTGAGAACGTTAGCAGTGT890.13341128149780396No Hit
GCTGCGTTCTTCATCGATGCCGTTCAGGTAGCAGGAAAACTTCCTATTCA860.12891427200911393No Hit
GCTGCGTTCTTCATCGATGCCCGCCGTGTTCGGTAGCGGGATCGCAAACT840.1259162656833206No Hit
GCTGCGTTCTTCATCGATGCGCGCAGGAACGCGGTCCCGTACAGGGGTCC840.1259162656833206No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGTGAGTCG790.11842124986883723No Hit
GCTGCGTTCTTCATCGATGCGAGAGTCGAGATATCCGTTGCCGAGAGTCG750.11242523721725053No Hit
GCTGCGTTCTTCATCGATGCGAGAACCGAGATATCCGTTGCCGAGAGTCG730.10942723089145717No Hit
TCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT710.10642922456566384No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT710.10642922456566384No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCAGAGAGTCG710.10642922456566384No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG680.10193221507697381No Hit
GCTGCGTTCTTCATCGATGCTGGAATTCCTCCCGCTGCGTTCTTCATCGA670.10043321191407714No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)