FastQCFastQC Report
Sun 21 May 2023
EGAF00007832632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71869
Sequences flagged as poor quality0
Sequence length235-238
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1862425.91381541415631No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1633922.734419568937927No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT834411.610012661926561No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT722310.050230280092947No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA34804.842143344140033No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT17602.4489000820938096No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA8411.170184641500508No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG7651.0644366834100933No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG6010.8362437212149884No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA5360.7458013886376602No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4350.6052679180175041No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3950.5496110979699176No Hit
GCTGCGTTCTTCATCGATGTCTTCTTTTGTAGCATCAGCCGGGAAAGTCA3220.448037401383072No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT2920.40629478634738203No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG2730.3798577968247784No Hit
GCTGCGTTCTTCATCGATGACGACAAGCCCGTACGCGCCCCAGTTCAGGC2600.3617693303093128No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT2510.3492465457986058No Hit
GCTGCGTTCTTCATCGATGTAAGAGCCGAGATATCCGTTGCCGAGAGTCG2290.3186352947724332No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG2280.3172438742712435No Hit
GCTGCGTTCTTCATCGCTTCGAGAACGAGCAATTTCTGACCTTTCTTAAC2240.31167819226648485No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC2170.3019382487581572No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCAAGAGTCG2100.29219830524982954No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA2080.28941546424745024No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2020.28106694124031223No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1920.26715273622841557No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1730.24071574670581197No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC1700.23654148520224297No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGATATATCCGTTGCCGAGAGTCG1700.23654148520224297No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTCGCAAATCA1680.23375864419986364No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1630.22680154169391534No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGTCAAACT1600.22262728019034633No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT1530.21288733668201865No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCAGAGAGTAG1520.211495916180829No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAAGCCGGACGATCGGGCAAACT1510.21010449567963932No Hit
GCTGCGTTCTTCATCGATGTGAGAGCCGAGATATCCATTGCCAAGAGTCA1340.18645034715941505No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1170.16279619863919073No Hit
GCTGCGTTCTTCATCGATGCGTTGGTGTTCCTGGGCTGCGTTCTTCATCG1140.15862193713562175No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1120.15583909613324243No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1110.15444767563205275No Hit
GCTGCGTTCTTCATCGATGCCTCTTCCGAAGCCGGACGATCGGGCAAACT1070.1488819936272941No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA1010.14053347062015611No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT990.1377506296177768No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA980.1363592091165871No Hit
CCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT930.1294021066106388No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG910.12661926560825948No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGACGAGAGTCG890.12383642460588014No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG860.11966216310231115No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA840.11687932209993182No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT800.11131364009517317No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT770.10713937859160418No Hit
CCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG720.10018227608565584No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA720.10018227608565584No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)