FastQCFastQC Report
Sun 21 May 2023
EGAF00007832634

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832634
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences107306
Sequences flagged as poor quality0
Sequence length236-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3352431.24149628166179No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1889217.60572568169534No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGATG48464.516056884051218No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG35483.3064320727638714No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG25982.4211134512515606No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT20071.8703520772370603No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCGAT14851.3838927925745064No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT13901.2953609304232754No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT13231.2329226697481968No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGGT12911.2031014109183085No Hit
GCTGCGTTCTTCATCGATGCAGGTAACGACGCTGCGTTCTTCATCGATGC12361.1518461223044376No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT12251.1415950645816637No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT12011.1192291204592473No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCGGCT11481.0698376605222448No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG11171.0409483160307904No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT10550.9831696270478817No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG9180.8554973626824223No Hit
GCTGCGTTCTTCATCGATGCTAGAGCCAAGAGATCCGTTGTTGAAAGTTT8360.7790803869308334No Hit
GCTGCGTTCTTCATCGAGGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA7730.7203697836094907No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG6990.6514081225653737No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG4650.43334016737181524No Hit
GCTGCGTTCTTCATCGATGCTAACCTCACCGCTCTTTGGACGCAACAAAC4640.43240825303338115No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT4470.41656570928000297No Hit
GCTGCGTTCTTCATCGATGCAAAAAACGCATCCATGTCAACATGAATGAT4400.41004230891096494No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT4340.4044508228803608No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4320.4025869942034928No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG4240.3951316794960207No Hit
GCTGCGTTCTTCATCGATGCCATTGAAAGTATACCAATAGCTTTCTCTAT3820.35599127728179225No Hit
GCTGCGTTCTTCATCGATGCTAAGGTAACGACGCTGCGTTCTTCATCGGC3770.3513317055896222No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG3700.34480830522058414No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3670.3420125622052821No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGATGA3640.33921681918998003No Hit
GCTGCGTTCTTCATCGATGCAGGGCGAGAGGGTGAGCTTATCTTCAGATA3450.32151044675973384No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAGC3370.31405513205226177No Hit
GCTGCGTTCTTCATCGATGTCGATGAAGGAGTCATAGCGCTCGGAGCGCA3220.30007641697575155No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC3170.29541684528358153No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTTCCGTCTTTTCTTCTTGTTT3030.28237004454550535No Hit
GCTGCGTTCTTCATCGATGCAGGTACCTAGCAATCCATCGCCTAACGGTG2880.2683913294689952No Hit
GCTGCGTTCTTCATCGATGTAAGGTAACGACGCTGCGTTCTTCATCGATG2560.23857007063910687No Hit
GCTGCGTTCTTCATCGATGCAGGTAACGACGCTGCGTTCTTCATCGGCTC2500.2329785846085028No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTCTTCA2300.21434029783982256No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCATTGTTGAAAGTTG2180.20315732577861445No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2160.2012934971017464No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG2140.1994296684248784No Hit
GCTGCGTTCTTCATCGACGATCAACAGCCCGAGGTCAAAAAACTGCACGC2100.19570201107114235No Hit
GCTGCGTTCTTCATCGATGCGGTCAACCATACGCGCTCTCTCCATATCAT2030.18917861070210426No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT2030.18917861070210426No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG1940.18079138165619815No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA1880.1751998956255941No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCCTTG1840.17147223827185804No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCTGAGAGTCG1830.17054032393342405No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1750.16308500922595195No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG1730.16122118054908394No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGATTCG1700.1584254375337819No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1670.15562969451847986No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGGCTC1670.15562969451847986No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT1510.14071906510353568No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCATTGCCGAGAGTCG1430.1332637503960636No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1430.1332637503960636No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG1340.12487652135015749No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTTG1330.1239446070117235No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT1330.1239446070117235No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT1300.12114886399642145No Hit
GCTGCGTTCTTCATCGATGAAGGTAACGACGCTGCGTTCTTCATCGATGC1200.11182972061208134No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG1200.11182972061208134No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1170.10903397759677931No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG1160.10810206325834529No Hit
GCTGCGTTCTTCATCGATGCCTGCGGATGCAATTGCCTCGACACTCGGGT1160.10810206325834529No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG1140.10623823458147726No Hit
GCTGCGTTCTTCATCGATGCAAGGTAACGACGCTGCGTTCTTCATCTGCT1130.10530632024304326No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)