FastQCFastQC Report
Sun 21 May 2023
EGAF00007832663

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832663
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences101058
Sequences flagged as poor quality0
Sequence length247-250
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC5126750.73027370420946No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG1200411.878327297195671No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC65346.4655940153179365No Hit
GGAAGTAAAAGTCGTAACAAGGCTCAAGTTGAAAAACGCTTGAACCAAGT32633.2288388846009224No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC30232.9913515011181695No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG20522.0305171287775337No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC20171.995883552019632No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA16531.6356943537374578No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC12871.2735260939262603No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC8900.8806823804152072No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCTATCGCAGCGGGTTTCCA8680.8589127035959548No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGTAAACTGAATCCGAAAAGAGCACA8050.7965722654317322No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTAGGTGAACCTGCGGAGGGATC6320.6253834431712482No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGTGGCTGGAAC5430.5373152051297274No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA5340.5284094282491243No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC5070.5016920976073146No Hit
GGAAGTAAAAGTCGTAACAAGCGGTAAGAAGAATACAATCAACACTTGAC4140.40966573650774807No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC4060.4017494903916563No Hit
GGAAGTAAAAGTCGTAACAAGGAACGTTCAGCGATAGCTGCAGGTTTCCA3590.35524154445961725No Hit
GGAAGTAAAAGTCGTAACAAGGAAAGAAAACAGAATCCGAAAAGAGCACA3230.3196184369372044No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC2770.2741000217696768No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG2610.2582675295374933No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTACTGATTTATTGGTAGCATCCTCC2380.23550832195372956No Hit
GGAAGTAAAAGTCGTAACAAGGAGCTGTTGAAAAAGCTGGTAATTGTCAT2350.23253972966019512No Hit
GGAAGTAAAAGTCGTAACAAGCACACAATGAACTTACTAATAGTTCAATC2030.20087474519582815No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG1930.19097943755071345No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACGATTAGCACTTGAC1880.18603178372815612No Hit
GGAAGTAAAAGTCGTAACAAGGGGCGTAAGTTCAAAGTCAATATCGTCTA1760.17415741455401848No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC1690.16723069920243822No Hit
GGAAGTAAAAGTCGTAACAAGGACGTGGTGTGTGGAACCAGGAGAGCAAA1690.16723069920243822No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCGATCAG1670.16525163767341527No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTCCATTGCG1660.1642621069089038No Hit
GGAAGTAAAAGTCGTAACAAGCGGCAAGAAGAATACAATCAACACTTGAC1600.15832492232183498No Hit
GGAAGTAAAAGTCGTAACAAGGGCGTAAGCAGAAAACAAGACAAATAACG1510.14941914544123178No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT1480.14645055314769737No Hit
GGAAGTAAAAGTCGTAACAATGCGCTACATCATTGCCTTGGAACCCCTTG1410.13952383779611707No Hit
GGAAGTAAAAGTCGTAACAAGGTTGTGTCGGGCGTCAAGAAGGCCTGTCA1390.13754477626709416No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACATGCGGAAGGATC1240.12270181479942212No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAAACTGCGGAAGGATC1220.12072275327039918No Hit
GGAAGTAAAAGTCGTAACAAGGCGGACTGCATGAAAGCGGCCGACGCACA1200.11874369174137624No Hit
GGAAGTAAAAGTCGTAACAAGGAAGAAGTGAAATTCCTGAATAGACCAAT1150.1137960379188189No Hit
GGAAGTAAAAGTCGTAACAAGGTTTTCGTAGGTGAACCTGCGGAAGGATC1030.10192166874468127No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)