FastQCFastQC Report
Sun 21 May 2023
EGAF00007832666

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832666
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences70934
Sequences flagged as poor quality0
Sequence length235-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2615336.869484309358No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1846226.02701102433248No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA48876.889502918205656No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT31344.418191558350015No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA18162.5601263146023063No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG14782.083627033580511No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG14462.0385146756139507No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT7811.1010234866213664No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT6580.9276228606873995No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT5880.8289395776355485No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT5060.7133391603462373No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4630.6527194293286717No Hit
GCTGCGTTCTTCATCGATGACAGTCTCGACTATCTCGAGCGAATCGACGA3740.5272506837341755No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA2850.40178193813967916No Hit
GCTGCGTTCTTCATCGATGCTTGGAAATAGGTTGCTGAACGAACGACTTT2200.3101474610201032No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT2180.30732793864719316No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTGCCG1700.23965940169735248No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1680.23683987932444245No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT1670.23543011813798742No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT1550.21851298390052726No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1500.21146417796825218No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1470.20723489440888712No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1390.19595680491724699No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA1380.194547043730792No Hit
CCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1340.18890799898497193No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1300.18326895423915188No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA1280.18044943186624185No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC1270.17903967067978685No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT1260.17762990949333182No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1250.1762201483068768No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1230.17340062593396677No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1150.1621225364423267No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG1110.1564834916965066No Hit
GCTGCGTTCTTCATCGATGGGGCATCTATGTGTCGCTGTTGGTGACGTTT1090.15366396932359658No Hit
GCTGCGTTCTTCATCGATTAATCCAAGTTCTTTAGCCTGGCTTGCTGAAT1060.14943468576423152No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1000.14097611864550144No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT920.12969802915386133No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT900.1268785067809513No Hit
GCTGCGTTCTTCATCGATGCCCGGCTTCCTTTTTCTCTTTATCGAAAAAA850.11982970084867624No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCTGGCAAACT850.11982970084867624No Hit
TCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT830.11701017847576621No Hit
GCTGCGTTCTTCATCGATGAAGAGCTGTTTGCGACTCTCGCCACTCATCG750.10573208898412609No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG740.10432232779767107No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA710.10009304423830602No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)