FastQCFastQC Report
Sun 21 May 2023
EGAF00007832694

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832694
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences99685
Sequences flagged as poor quality0
Sequence length237-238
%GC60

[WARN]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG5068550.84516226112253No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT999710.028590058684857No Hit
GCTGCGTTCTTCATCGATGCGAAGGCTTAGCTGCTGCGTTCTTCATCGAT48534.868335256056578No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGATGA46104.6245673872699005No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG24592.466770326528565No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG21482.154787580879771No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT20552.0614937051712894No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG20482.0544715854943068No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGGCTC19511.9571650699704068No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGATGC17191.7244319606761298No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG16651.670261323167979No Hit
GCTGCGTTCTTCATCGATGCGAAGGCTTAGCTGCTGCGTTCTTCATCGGC10281.0312484325625721No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT7660.7684205246526559No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT6200.6219591713898781No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT5440.5457190148969253No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCATTGCTGAAAGTTG3970.3982545016802929No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3780.37919446255705475No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT3760.3771881426493454No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3230.3240206650950494No Hit
GCTGCGTTCTTCATCGATGCTAGGTTTTTTACTTCTTCTTTTGCTTCAAC3200.3210111852334855No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2460.24677734864824197No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC2420.2427647088328234No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2360.23674574910969556No Hit
GCTGCGTTCTTCATCGATGAAGGCTTAGCTGCTGCGTTCTTCATCGCCCC1980.19862567086321917No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT1970.1976225109093645No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG1840.18458143150925416No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1830.18357827155539952No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT1730.1735466720168531No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG1530.15348347293976025No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1490.14947083312434167No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT1340.13442343381652203No Hit
GCTGCGTTCTTCATCGATGCCAGAGCCAAGAGATCCGTTGTTGAAAGTTT1300.13041079400110347No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGAGATCCGTTGTTGAAAGTTG1160.11636655464713848No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1150.11536339469328384No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1130.11335707478557457No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA1020.1023223152931735No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)