FastQCFastQC Report
Sun 21 May 2023
EGAF00007832708

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832708
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences61546
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1566325.449257465960418No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA920014.94816884931596No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG871214.155265979917461No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA36385.911025899327332No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG35325.738796997367823No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT34215.558444090598902No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG17932.9132681246547296No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT9261.5045656907028888No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT8681.410327234913723No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT8611.398953628180548No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT7361.1958535079452766No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG6431.044747018490235No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG4840.78640366555097No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT4540.7376596366945048No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA3560.5784291424300523No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3530.5735547395444058No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGCCAAAAGTTG3420.5556819289637019No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG3070.498813895297826No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2920.4744418808695935No Hit
GCTGCGTTCTTCATCGATGCTGGAATTCCTCCCGCTGCGTTCTTCATCGA2390.38832742988983854No Hit
GCTGCGTTCTTCATCGATGCAGGTATCGAGCATGCCCTCAAGGCCTTCGA2320.3769538231566633No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT2190.3558314106521951No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT2100.3412082019952556No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2050.3330841971858447No Hit
GCTGCGTTCTTCATCGAGGTATCTGCGACGCTGATTTTCATCTTGGATAA2010.3265849933383161No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTACAAATTA1980.32171059045266953No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1780.28921457121502614No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1640.2664673577486758No Hit
GCTGCGTTCTTCATCGATGCCGCCAAAATCGGCAGGGAACTGGGCTGGAA1550.25184414909173625No Hit
GCTGCGTTCTTCATCGATGCTGGAATTCCTCCGGCTGCGTTCTTCATCGA1330.21609852793032852No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1250.2031001202352712No Hit
GCTGCGTTCTTCATCGATGCTGGAATTCCTCCTGCTGCGTTCTTCATCGA1230.19985051831150685No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA1190.19335131446397816No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC1190.19335131446397816No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1190.19335131446397816No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAAGGCCGGAGGATCGGGCAAACT990.16085529522633477No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCTGACGATCGGGCAAACT950.1543560913788061No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT910.14785688753127743No Hit
GCTGCGTTCTTCATCGATGCTGGAATTCCTCCAGCTGCGTTCTTCATCGA830.13485847983622007No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGGCGAATGGTAAAGGGGATGT820.1332336788743379No Hit
GCTGCGTTCTTCATCGATGCCATCCGCGACGAATAAGTCCACTGCTGCCG740.12023527117928053No Hit
GCTGCGTTCTTCATCGATGCGTCGTTATTTTACTCCGCAAATCAAAATAA690.11211126636986969No Hit
GCTGCGTTCTTCATCGATGCAATAAGATGCCCACCATGGTCAGTTGGCAG680.11048646540798752No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT650.10561206252234101No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)