FastQCFastQC Report
Sun 21 May 2023
EGAF00007832714

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832714
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75662
Sequences flagged as poor quality0
Sequence length235-238
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT1831724.208982051756493No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT966712.776558906716714No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG75119.927043958658244No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT65918.71110993629563No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA35744.723639343395628No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT31144.115672332214322No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA19552.5838597975205517No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG13101.7313843144511114No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT12641.6705876133329811No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC10971.4498691549258544No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG10521.3903941212233353No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTA7801.0309005841769976No Hit
GCTGCGTTCTTCATCGATGCCTTGCACCGGGTCTTCGTAGTGCCTGTCCA7520.9938938965398747No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCTCCTGTCCGAGGT7070.9344188628373556No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT7070.9344188628373556No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT6860.9066638471095133No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG6060.8009304538605905No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG5910.7811054426264175No Hit
GCTGCGTTCTTCATCGATGCGCAAGGATAAGAACACGCTTACCCCTGCGA5710.7546720943141867No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT4750.6277920224154794No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT4530.5987153392720256No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT3500.46258359546403743No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT3340.4414369168142529No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3270.4321852449049721No Hit
GCTGCGTTCTTCATCGATGGGAGAACCTAGAGATCCGTTGTCGAAAGTTG3240.4282202426581375No Hit
GCTGCGTTCTTCATCGATGCCCTCTATCAGACGAATGGTAAAGGGGATAT3170.41896857074885674No Hit
GCTGCGTTCTTCATCGATGCTACCCTTATCTGCAGCAGCTGGAATCTCTG2640.3489201977214454No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT2600.3436335280589992No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT2520.3330601887341069No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA2400.3172001797467685No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC2350.31059184266871087No Hit
GCTGCGTTCTTCATCGATGCTGGAGCCAAGAGATCCGTTGTTAAAAGTTT2320.3066268404218762No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2250.2973751685125955No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2000.2643334831223071No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGCTTTTTTCTTTACGCT1940.2564034786286379No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACATCGCGTGGGCAGATCATCC1930.25508181121302637No Hit
GCTGCGTTCTTCATCGATGCGGATACGCTGAGCACCGTGACGCCGGACAA1910.2524384763818033No Hit
GCTGCGTTCTTCATCGATGCCGAATACTTACGGCGCAGACAGGACACCCA1860.2458301393037456No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTGTCAAGAACGAGTTCGTAAT1850.2445084718881341No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG1520.20089344717295338No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT1470.19428511009489574No Hit
GCTGCGTTCTTCATCGATGCCACCACCTCAATGCCATCTCGCTGATCTGG1420.18767677301683805No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTTG1400.18503343818561496No Hit
GCTGCGTTCTTCATCGATGCCGTTCAGGTAGCAGGAAAGCTTCCTATTCA1240.1638867595358304No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGTCGTCT1180.1559567550421612No Hit
GCTGCGTTCTTCATCGATGCCCAGTGCGGCTGCTGAACGGAATATCGCCC1150.1519917527953266No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1020.1348100763923766No Hit
GCTGCGTTCTTCATCGAAACGGATATAACTACCATCTTTTCTTCTGGTCT1000.13216674156115354No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT930.1229150696518728No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG920.12159340223626128No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAATACTGTAATGTCTTC860.11366339774259206No Hit
GCTGCGTTCTTCATCGATGCTTACCTAGCAAGCGCTGCGTTCTTCATCGA860.11366339774259206No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAAGGCCGGAGGATCGGGCAAACT820.10837672808014591No Hit
GCTGCGTTCTTCATCGATGCCATAAAGCGCCTTTCGGGACGGGTTCCGAT800.10573339324892284No Hit
GCTGCGTTCTTCATCGATGCTCATTATCTTTTTTTTTTGGTAATAGTTAT790.10441172583331132No Hit
GCTGCGTTCTTCATCGATGCGTCGGACAGCCACAATCAACGCACATGCGG760.10044672358647669No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)