FastQCFastQC Report
Sun 21 May 2023
EGAF00007832718

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832718
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63267
Sequences flagged as poor quality0
Sequence length236-238
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT941014.87347274250399No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT809812.799721813899822No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA57489.085305135378634No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT32285.102185973730381No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG32195.087960548153066No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCCGCTGCGTTCTTCATCGA22683.5848072454834274No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGA20373.2196879889990044No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGA18622.9430824916623197No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA16862.664896391483712No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCAGCTGCGTTCTTCATCGA13672.1606840849099846No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGG8841.3972529122607362No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCGGCTGCGTTCTTCATCGAT8291.3103197559549211No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC8121.2834495076422148No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCCGCTGCGTTCTTCATCGAT8121.2834495076422148No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT7711.2186447911233345No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGG6200.979973761992824No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCCGCTGCGTTCTTCATCGG6110.965748336415509No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCAGCTGCGTTCTTCATCGG5880.9293944710512589No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG5380.8503643289550635No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCTGCTGCGTTCTTCATCGAT5170.8171716692746614No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG5140.8124298607488897No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACTGTAATGTCTTC5000.7903014209619549No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA4840.7650117754911723No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4050.6401441509791834No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCAGCTGCGTTCTTCATCGAT3740.5911454628795423No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3670.5800812429860749No Hit
GCTGCGTTCTTCATCGAACCAACCGTTCGGCTGCGTTCTTCATCGAACCA2870.45363301563216213No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2860.4520524127902382No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA2790.4409881928967708No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT2590.4093761360582926No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCGGCTGCGTTCTTCATCGGC2460.3888282991132818No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2370.3746028735359666No Hit
GCTGCGTTCTTCATCGATGCGTGGTTTTCGCAAATTAAAGCAGTCTGATT2230.35247443374903187No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA2160.3414102138555645No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2040.3224429797524776No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCCGCTGCGTTCTTCATCGGC1880.29715333428169505No Hit
GCTGCGTTCTTCATCGAACCAACCGTTCCGCTGCGTTCTTCATCGAACCA1800.2845085115463038No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT1650.2607994689174451No Hit
GCTGCGTTCTTCATCGATGAACCAACCGTTCGGCTGCGTTCTTCATCGAT1580.24973524902397776No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCGGCTGCGTTCTTCATCGC1540.2434128376562821No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCTGCTGCGTTCTTCATCGGC1530.24183223481435817No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1520.2402516319724343No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT1500.23709042628858645No Hit
GCTGCGTTCTTCATCGATGCACCAACCGTTCAGCTGCGTTCTTCATCGGC1460.2307680149208908No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1420.2244456035531952No Hit
GCTGCGTTCTTCATCGATGAACCAACCGTTCCGCTGCGTTCTTCATCGAT1330.21022017797588002No Hit
GCTGCGTTCTTCATCGATAAAGTCGAGAGAAATTTGCGCCTGTCCGAGGT1240.1959947523985648No Hit
GCTGCGTTCTTCATCGATGAACCAACCGTTCTGCTGCGTTCTTCATCGAT1210.19125294387279307No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC1120.1770275182954779No Hit
GCTGCGTTCTTCATCGAAACCAACCGTTCGGCTGCGTTCTTCATCGAAAC1110.17544691545355398No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCCGCTGCGTTCTTCATCGC1030.1628020927181627No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1020.1612214898762388No Hit
GCTGCGTTCTTCATCGATGCGAGAGGCGAGATATCCGTTGCCGAGAGTCG940.14857666714084752No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA920.14541546145699968No Hit
GCTGCGTTCTTCATCGAACCAACCGTTCAGCTGCGTTCTTCATCGAACCA880.13909305008930406No Hit
GCTGCGTTCTTCATCGAACCAACCGTTCTGCTGCGTTCTTCATCGAACCA880.13909305008930406No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA860.13593184440545625No Hit
GCTGCGTTCTTCATCGATGCCTGCAACAGCGCGGCTAGTTTCATTACCAC860.13593184440545625No Hit
GCTGCGTTCTTCATCGATGATGATTTGCAGGCGGTCGCGCGCGACGGTGG850.13435124156353234No Hit
GCTGCGTTCTTCATCGATGCGAGAGTCGTATTTTATTAAGTAAGACGCCG810.1280288301958367No Hit
GCTGCGTTCTTCATCGATGAACCAACCGTTCAGCTGCGTTCTTCATCGAT800.12644822735391278No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCTGCTGCGTTCTTCATCGC800.12644822735391278No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT760.12012581598621715No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT760.12012581598621715No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT750.11854521314429323No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCTGGCAAACT750.11854521314429323No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGCCAAACT750.11854521314429323No Hit
GCTGCGTTCTTCATCGATGCAACCAACCGTTCAGCTGCGTTCTTCATCGC710.1122228017765976No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT700.1106421989346737No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA690.10906159609274978No Hit
GCTGCGTTCTTCATCGATGCCAGGGGTGACGCCGACGGAGTCTTTGGTGA660.10431978756697805No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT660.10431978756697805No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT640.10115858188313022No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)