FastQCFastQC Report
Sun 21 May 2023
EGAF00007832721

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832721
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences164541
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC4590727.900037072826834No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA2896917.60594623832358No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG1694210.296521839541512No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC102466.2270194054977175No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC94295.7304866264335335No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG94115.719547103761372No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC74404.521669371159772No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC69114.200168954850159No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC29081.7673406628135238No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGTGAACGTGCGGATGGACT20981.2750621425662905No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC13250.8052704189229432No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC11630.7068147148734966No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGATGAAGAACGCAGCTACGGTCTT5830.35431898432609504No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCAGAAGGATC5080.3087376398587586No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC5050.30691438608006516No Hit
GGAAGTAAAAGTCGTAACCAAGTTAAAACCCTGCCGCGTATGCAAACAAA4650.2826043356974858No Hit
GGAAGTAAAAGTCGTAACAAGGTCGACAAGTTTATGGAGACCAGCGTCAA4310.2619407928722932No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGGGAACGTGGGGATGGATC4290.2607252903531643No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGGTTTGCGATGACGATGATGGCGC3960.24066949878753624No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC3870.2351997374514559No Hit
GGAAGTAAAAGTCGTAACAAGGTGTACATAAAAGGCGACGGCGGAAAATG3860.2345919861918914No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC3600.21879045344321474No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG3410.20724317951148954No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC2900.17624786527370076No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGAGGAAGGATC2770.16834709889936247No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC2670.16226958630371763No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2570.15619207370807275No Hit
GGAAGTAAAAGTCGTAACAAGGTTTGCGTAGGTGAACCTGCGGAAGGATC2510.15254556615068585No Hit
GGAAGTAAAAGTCGTAACAAGGTAACCGTAGGGGAACCTGCGGTTGGATC2470.1501145611124279No Hit
GGAAGTAAAAGTCGTAACAAGAGCAGAAGGAATTCAGAAGAGCCAGGGTG2230.13552853088288025No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC2200.1337052771041868No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC2010.12215800317246156No Hit
GGAAGTAAAAGTCGTAACAAGGCACGGCGCAAGAGCGGAGAAATACGGCC1990.1209425006533326No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGATAATGAAGAAACAAAGGTTGGT1920.11668824183638121No Hit
GGAAGTAAAAGTCGTAACAAGGTAGAGAAAATGAAGAAATAAAGGTTGGT1700.10331771412596252No Hit
GGAAGTAAAAGTCGTAACAAGGGATTTATGATTTGGGTAGACCTACGCGA1700.10331771412596252No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAATGATC1660.10088670908770458No Hit
GGAAGTAAAAGTCGTAACAAGGATGTGCATGTACCCATCGTAAAGCGAAG1660.10088670908770458No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCGAAGGGGAACCTGCGGAAGGATC1650.10027895782814011No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)