FastQCFastQC Report
Sun 21 May 2023
EGAF00007832723

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832723
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68084
Sequences flagged as poor quality0
Sequence length247-250
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1836026.966688208683394No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC904913.290934727689324No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCACTTAC58858.643734210680924No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC43806.433229539980025No Hit
GGAAGTAAAAGTCGTAACAAGGACAAGCAATCGGGATTTTAGCCGGTGAA42176.1938193995652435No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT36065.2963985664767055No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG35035.145114858116444No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC24053.5324011515187124No Hit
GGAAGTAAAAGTCGTAACAAGGCATCGAAGGTTTGGTACACGTTTCCGAA14672.1546912637330355No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG11641.709652781857705No Hit
GGAAGTAAAAGTCGTAACAAGGCGGAGTTGCACAAACTCTTTTTTGATTT8861.3013336466717584No Hit
GGAAGTAAAAGTCGTAACAAGGATCTTAGCGACTTGCTGCGTGAGATAGA7341.0780800188003055No Hit
GGAAGTAAAAGTCGTAACAAGGTACCCGAATGCCGGATTCCTCGCTAACA5260.7725750543446331No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACCGGAAGGTGCGGATGGATC5050.7417308031255507No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCCTACGAGAACGTGGGGATGGATC4110.6036660595734681No Hit
GGAAGTAAAAGTCGTAACAAGGATATATTCTGCTGTATAGAAGCAAGGTT3870.5684154867516598No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC3340.4905704717701662No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACGGGAACGTGCGGCTGGATC3210.47147641149168673No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC2790.40978790905352214No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2780.40831913518594676No Hit
GGAAGTAAAAGTCGTAACAAGGCTAAGGGCGACGAAAGGGAAAAGACAAG2450.3598495975559603No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC2450.3598495975559603No Hit
GGAAGTAAAAGTCGTAACAACAGCAACGGTTTCAGTCCATATAGGACGCA2340.34369308501263146No Hit
GGAAGTAAAAGTCGTAACAAGGTTTAAAAAATATCTGATCCACGATGAAA2340.34369308501263146No Hit
GGAAGTAAAAGTCGTAACAAGGAGGGGATCGTCGGCGGGTGCGGCCTTTC2050.30109864285294635No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCAAGATCGACGAGGACTATACCAA1820.26731684389871335No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGAGAACCTGCGGCTGGATC1480.21737853240115151No Hit
GGAAGTAAAAGTCGTAACAAGGACAATGTGTCGTTATCGATTACGGTATC1400.20562834146054873No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCCATAGGTGAACCTGCGGAAGGATC1200.17625286410904176No Hit
GGAAGTAAAAGTCGTAACAAGGAAGGAGCATATATGATTCAGCAGGAAAC1190.17478409024146643No Hit
GGAAGTAAAAGTCGTAACAAGGAAGACAACTGAGGAATGGTGATGTTGCG1150.16890899477116503No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGTGAACGTGCGGATGGACT1110.16303389930086362No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT1080.1586275776981376No Hit
GGAAGTAAAAGTCGTAACAAGGAGGAACCAACATGACTGATGAAGAAAAA1060.1556900299629869No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGAAC920.13512719581693203No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG880.12925210034663062No Hit
GGAAGTAAAAGTCGTAACAAGGATGCGACTGAATAACGTGGTCGATTAAC840.12337700487632924No Hit
GGAAGTAAAAGTCGTAACAAGGAATCGGACCGGCATACCATGCGCATCCA820.12043945714117854No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACACATGGCTCAAGCAGAGCAAAA780.11456436167087715No Hit
GGAAGTAAAAGTCGTAACAAGAGCATCGACAAAATCGACGAGAGCGAGAC770.1130955878033018No Hit
GGAAGTAAAAGTCGTAACAAGGCCCACCAAATCGGGATATCGGCAATTAC750.1101580400681511No Hit
GGAAGTAAAAGTCGTAACAAGGCTACGGAAAAGAAAGTTTTGGTGGGTAA700.10281417073027437No Hit
GGAAGTAAAAGTCGTAACAAGGGAACTGGAAGTTGACGAGCATCGCATCT700.10281417073027437No Hit
GGAAGTAAAAGTCGTAACAAGGATAACGTGGAATTTGGGACTCAGCCAAC690.10134539686269901No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)