FastQCFastQC Report
Sun 21 May 2023
EGAF00007832724

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832724
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68084
Sequences flagged as poor quality0
Sequence length236-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT755811.100992891134482No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGCCGAGAGTCG64799.51618588802068No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT57328.419011808941896No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA39175.753187239292639No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT33244.882204335820457No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC32574.783796486692909No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT26273.8584689501204394No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA23673.4765877445508493No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA19512.8655778156395044No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG18152.665824569649257No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT14692.1576288114681863No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT14522.1326596557194053No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG11291.658245696492568No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT9291.3644909229774984No Hit
GCTGCGTTCTTCATCGATGCTGTCTGCGTAATCGTGGATTGTCTTATGAC6500.9547030139239762No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGCGCTGCGTTCTTCATCGAT6360.9341401797779213No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG6170.9062334762939896No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT5200.763762411139181No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC5090.7476058985958522No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGGGCTGCGTTCTTCATCGAT3930.5772281299571118No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGTGCTGCGTTCTTCATCGAT3850.565477939016509No Hit
GCTGCGTTCTTCATCGATGCGTGGTTTTCGCAAATTAAAGCAGTCTGATT3700.5434463310028788No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT3650.5361024616650021No Hit
GCTGCGTTCTTCATCGATGCCGATACTGGGGCTGCGTTCTTCATCGATGC3570.5243522707243993No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG3270.4802890546971388No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3230.4744139592268375No Hit
GCTGCGTTCTTCATCGATGCCGATACTGGCGCTGCGTTCTTCATCGATGC3030.44503848187533046No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT2870.4215380999941249No Hit
GCTGCGTTCTTCATCGATGCCGATACTGGTGCTGCGTTCTTCATCGATGC2860.42006932612654957No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCTAGGCATCCACCGTATGCCCTT2830.4156630045238235No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA2730.4009752658480701No Hit
GCTGCGTTCTTCATCGATGCTTCCGATACTGGCGCTGCGTTCTTCATCGA2610.38334997943716587No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT2500.36719346689383703No Hit
GCTGCGTTCTTCATCGTTCCGATACTGGCGCTGCGTTCTTCATCGTTCCG2460.3613183714235356No Hit
GCTGCGTTCTTCATCGATGCCCGATACTGGCGCTGCGTTCTTCATCGATG2400.3525057282180835No Hit
GCTGCGTTCTTCATCGATGCCGTTCACAGCCGATGCTGCATCATCCTCGT2390.3510369543505082No Hit
GCTGCGTTCTTCATCGATGCTTCCGATACTGGGGCTGCGTTCTTCATCGA2370.3480994066153575No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2340.34369308501263146No Hit
GCTGCGTTCTTCATCGATGCTTCCGATACTGGTGCTGCGTTCTTCATCGA2290.33634921567475473No Hit
GCTGCGTTCTTCATCGAATCTAATTAGTGAGCCGTTGCCTCTGTGCAACT2290.33634921567475473No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGGGCTGCGTTCTTCATCGGC2230.3275365724693026No Hit
GCTGCGTTCTTCATCGATGCGGAGTATGATGCGGCTGCACAGCAAACCGA2200.3231302508665766No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGAGCTGCGTTCTTCATCGAT2120.3113800599259738No Hit
GCTGCGTTCTTCATCGTTCCGATACTGGGGCTGCGTTCTTCATCGTTCCG1900.27906703483931616No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT1870.27466071323659014No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA1870.27466071323659014No Hit
GCTGCGTTCTTCATCGTTTCAAAACGCCTAGGCATCCGCCGTATGCCCTT1840.27025439163386406No Hit
GCTGCGTTCTTCATCGATGCGCGCCGATTCGAGCGGATGTTCGAGGCCGA1820.26731684389871335No Hit
GCTGCGTTCTTCATCGATGTTCCGATACTGGCGCTGCGTTCTTCATCGAT1770.2599729745608366No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1690.24822278362023384No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1550.22765994947417895No Hit
GCTGCGTTCTTCATCGATGCCCGATACTGGGGCTGCGTTCTTCATCGATG1520.22325362787145292No Hit
GCTGCGTTCTTCATCGATGCTTCCGATACTGGAGCTGCGTTCTTCATCGA1450.2129722107984255No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGCGCTGCGTTCTTCATCGGC1400.20562834146054873No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCTAGATATCCGTTGACGAGAGTCG1370.2012220198578227No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1370.2012220198578227No Hit
GCTGCGTTCTTCATCGATGCGTTTTGACTTCGCAAATAAAAATAAACTAC1360.19975324599024735No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTTAGATATCCGTTGCCGAGAGTCG1300.19094060278479524No Hit
GCTGCGTTCTTCATCGATGTTCCGATACTGGGGCTGCGTTCTTCATCGAT1230.1806591857117678No Hit
GCTGCGTTCTTCATCGATGTTCCGATACTGGTGCTGCGTTCTTCATCGAT1220.17919041184419246No Hit
GCTGCGTTCTTCATCGATGCCCGATACTGGTGCTGCGTTCTTCATCGATG1190.17478409024146643No Hit
GCTGCGTTCTTCATCGATGCCGATACTGGAGCTGCGTTCTTCATCGATGC1170.17184654250631573No Hit
GCTGCGTTCTTCATCGATGCTTCCGATACTGGGGCTGCGTTCTTCATCGG1170.17184654250631573No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA1120.164502673168439No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGTGCTGCGTTCTTCATCGGC1070.15715880383056224No Hit
GCTGCGTTCTTCATCGTTCCGATACTGGTGCTGCGTTCTTCATCGTTCCG1050.15422125609541154No Hit
GCTGCGTTCTTCATCGATTTAGGTACGTTGGTGAAACTGTATGGTATCGT1010.14834616062511016No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1000.1468773867575348No Hit
GCTGCGTTCTTCATCGATGCTCCGATACTGGAGCTGCGTTCTTCATCGGC950.13953351741965808No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG920.13512719581693203No Hit
GCTGCGTTCTTCATCGATGCCGATACTGGGGCTGCGTTCTTCATCGGCTC890.13072087421420597No Hit
GCTGCGTTCTTCATCGAAACGGATATAGCTACCATCTTTTCTTCTGGTCT860.12631455261147992No Hit
GCTGCGTTCTTCATCGATGCGGTGTTCTGGATTTTACGTACCGGTGCTCC800.11750190940602785No Hit
GCTGCGTTCTTCATCGATGCGGCCAAGGCGATAATTCCCTGTGTGCTCGC780.11456436167087715No Hit
GCTGCGTTCTTCATCGATGCCGTTGTCGACCGCTTCGCGGATCAGGTGGT770.1130955878033018No Hit
GCTGCGTTCTTCATCGATGCCGGTTTGTGGGACGAGGCTCTGGTGGAGGT770.1130955878033018No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTAAACACTGTAATGTCTTC760.11162681393572646No Hit
GCTGCGTTCTTCATCGATGCCCGATACTGGAGCTGCGTTCTTCATCGATG760.11162681393572646No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC750.1101580400681511No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC720.10575171846542507No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA710.1042829445978497No Hit
GCTGCGTTCTTCATCGATGCGACTATGGTAAGGCGCAGAAACAGTTTGGC710.1042829445978497No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGATGGTGGGAGC700.10281417073027437No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTTGGAGC700.10281417073027437No Hit
GCTGCGTTCTTCATCGATGCCCGATACTGGCGCTGCGTTCTTCATCGGCT690.10134539686269901No Hit
GCTGCGTTCTTCATCGATGTTCCGATACTGGAGCTGCGTTCTTCATCGAT690.10134539686269901No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)