FastQCFastQC Report
Sun 21 May 2023
EGAF00007832728

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832728
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences71702
Sequences flagged as poor quality0
Sequence length235-238
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA3753052.34163621656299No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT727710.1489498200887No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT30744.287188641878887No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG20022.7921117960447406No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG19382.7028534768904633No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT19302.691696186996179No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT19252.6847228808122505No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT9901.3807146244177289No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT8951.2482218069230984No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT7751.0808624585088282No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC6690.9330283674095562No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT6210.8660846280438481No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT4750.6624640874731528No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4450.6206242503695852No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG4210.5871523806867311No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT2810.39189980753674936No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG2480.34587598672282505No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA1840.25661766756854765No Hit
GCTGCGTTCTTCATCGATGCCAGCGCTGCGGGGTCGGGGATATCGGCGAG1720.2398817327271206No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT1520.2119885079914089No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCATTGTTAAAAGTTT1460.2036205405706954No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1330.18548994449248277No Hit
GCTGCGTTCTTCATCGATGCTCGTGCGCCGTTCCGCTACGATGGGTCTCA1280.17851663830855485No Hit
GCTGCGTTCTTCATCGATGCTTCATCATAGTCGCCATAACCATGAAGGCT1270.17712197707176927No Hit
GCTGCGTTCTTCATCGATGCCCACGCCGGTACGCTCGGCACGCTCGGCGC1250.17433265459819808No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1220.17014867088784136No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATTGGGGCTGCGTTCTTCATCG1160.16178070346712783No Hit
GCTGCGTTCTTCATCGATGCCAGCCACAAAACCTGCGGCAACAGTTGTGT1020.14225544615212965No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCACGCT1000.13946612367855848No Hit
GCTGCGTTCTTCATCGATACGAGAACCAAGAGATCCATTGTTAAAAGTTT970.1352821399682017No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG960.13388747873141615No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG950.13249281749463054No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATTGCGGCTGCGTTCTTCATCG910.1269141725474882No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA900.12551951131070263No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTAAAAGTTT850.11854620512677469No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTAGCAAATCAAAATAA820.11436222141641796No Hit
GCTGCGTTCTTCATCGATGCTTTTCAGTGCGTGCCCTTCGCACATCTGCG800.11157289894284678No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA790.11017823770606121No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATTGTGGCTGCGTTCTTCATCG780.10878357646927561No Hit
GCTGCGTTCTTCATCGATGCGCTATATCAATAGCGACCTCGCGCCTGAAA770.10738891523249003No Hit
GCTGCGTTCTTCATCGATGCCATGAATCCCTGCAGATATCCAACCAGCTC750.10459959275891885No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)