FastQCFastQC Report
Sun 21 May 2023
EGAF00007832730

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832730
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences109850
Sequences flagged as poor quality0
Sequence length236-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT4911144.7073281747838No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1656615.080564406008193No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT62625.700500682749204No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC34013.0960400546199365No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT24062.1902594446973147No Hit
GCTGCGTTCTTCATCGATGCGTACATAAACTATGTAGGAACGCCCGCGCT22752.0710059171597637No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGCGCTGCGTTCTTCATCGA18561.6895766954938551No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGTGCTGCGTTCTTCATCGA15821.4401456531634045No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGGGCTGCGTTCTTCATCGA15601.4201183431952662No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG15161.3800637232589894No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA11511.0477924442421485No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT10400.9467455621301776No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGAGCTGCGTTCTTCATCGA8320.757396449704142No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGGGCTGCGTTCTTCATCGG5490.4997724169321803No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGTGCTGCGTTCTTCATCGG5350.48702776513427404No Hit
GCTGCGTTCTTCATCGATGCCAAGGAGCGGATTAAACCCTTCAGTAAGAC4730.43058716431497496No Hit
GCTGCGTTCTTCATCGATGAAGAAAGGCAGGCCTGCAGGGATTCCTTCAC4580.4169321802457897No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4520.41147018661811563No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGCGCTGCGTTCTTCATCGG4370.3978152025489304No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG4350.3959945380063723No Hit
GCTGCGTTCTTCATCGATGCCGGTCGCTTTGGAAACCGCCGTGCGGACAT3900.35502958579881655No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCATTGTTGAAAGTTT3650.3322712790168411No Hit
GCTGCGTTCTTCATCGATGTTGTCGTAGGCTGCGTCCTCAATAAGCCATT3590.32680928538916704No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT3220.29312699135184345No Hit
GCTGCGTTCTTCATCGATCGTCTTCCTTATTCTCAGACAAAATAAACTTC2960.269458352298589No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA2740.2494310423304506No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG2660.2421483841602185No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCTAGGCCGGACGATCGGGCAAACT2630.2394173873463814No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT2570.23395539371870736No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCAAGGCCGGAGGATCGGGCAAACT2520.22940373236231223No Hit
GCTGCGTTCTTCATCGATGGAAGTCAACTGGTGCTGCGTTCTTCATCGAT2510.22849340009103322No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG2430.2212107419208011No Hit
GCTGCGTTCTTCATCGATGCGAAGTCAACTGGAGCTGCGTTCTTCATCGG2430.2212107419208011No Hit
GCTGCGTTCTTCATCGATTTCGCCCAACAATGCTTCAGGAGAAACGACAA2410.21939007737824304No Hit
GCTGCGTTCTTCATCGATGGAAGTCAACTGGCGCTGCGTTCTTCATCGAT2300.20937642239417387No Hit
GCTGCGTTCTTCATCGATGGAAGTCAACTGGGGCTGCGTTCTTCATCGAT2230.20300409649522075No Hit
GCTGCGTTCTTCATCGATGCCGGAGCCAAGAGATCCATTGTTGAAAGTTG2210.2011834319526627No Hit
GCTGCGTTCTTCATCGATGCCGTAGCAATGGCCGCAAAGCGCACGAAGAC2200.2002730996813837No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT2120.19299044151115158No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT2060.18752844788347747No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG2030.18479745106964043No Hit
GCTGCGTTCTTCATCGATACCGGTCGCTTTGGAAACCGCCGTGCGGACAT1770.16112881201638599No Hit
GCTGCGTTCTTCATCGATGTCGCTTCCGAGGCCGGACGATCGGGCAAACT1670.1520254893035958No Hit
GCTGCGTTCTTCATCGAAGTCAACTGGCGCTGCGTTCTTCATCGAAGTCA1450.13199817933545743No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGACAAACT1380.12562585343650431No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1370.1247155211652253No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1340.12198452435138826No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG1330.12107419208010925No Hit
GCTGCGTTCTTCATCGCTGTCAGATGCCTTGGCATCCTTCGTATGCCCTT1270.11561219845243513No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT1260.11470186618115612No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGTGCAAACT1110.10104688211197087No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)