FastQCFastQC Report
Sun 21 May 2023
EGAF00007832732

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832732
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74737
Sequences flagged as poor quality0
Sequence length235-238
%GC62

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4116655.081151237004434No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAT927212.406170972878225No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGGC17822.3843611598003664No Hit
GCTGCGTTCTTCATCGACTCGAAACGCCTAGGCATCCACCGTATGCCCTT17482.338868298165567No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA11771.574855827769378No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGATG11091.4838701044997793No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT10161.359433747675181No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG9831.3152789113825816No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAAAACAGGAACAACACAATGTGTT8581.148025743607584No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT6650.8897868525629876No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT5760.7707025971071892No Hit
GCTGCGTTCTTCATCGACCCGAAACGCCTAGGCATCCACCGTATGCCCTT5450.7292238114989898No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCA4770.6382380882293911No Hit
GCTGCGTTCTTCATCGATGCGCTGTCGGTAAGCTGCGTTCTTCATCGATG4300.575350897145992No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT3850.5151397567469929No Hit
GCTGCGTTCTTCATCGACGACAGTCTCGACTATCTCGAGCGAATCGACGA3660.48971727524519315No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG3580.47901307250759323No Hit
GCTGCGTTCTTCATCGATGCCGAGTCGGACCTCGCCGGGGATCACGTTCA3440.4602807177167935No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA2840.3799991971847947No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACACGTGT2760.3692949944471948No Hit
GCTGCGTTCTTCATCGATGCAGGTGAAGAGGTCTATGGCGGACAGGTCGT2260.3023937273371958No Hit
GCTGCGTTCTTCATCGATGCCGCCGATTCCGGAGAAGGCCTGCTCGGGGA2200.2943655752839959No Hit
GCTGCGTTCTTCATCGATGAATCCTTTTTCGCAAAAAGCCTTCCGGACAT2160.28901347391519594No Hit
GCTGCGTTCTTCATCGATGCCCATACGAATGATCGGAAGGTGGAAAAGGG2040.27295716980879614No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT1990.26626704309779625No Hit
GCTGCGTTCTTCATCGATGAGCTGTCGGTAAGCTGCGTTCTTCATCGGCT1860.24887271364919653No Hit
GCTGCGTTCTTCATCGATGCCGCCTCCAGACGGAATCTGGAACTCACAGA1650.2207741814629969No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1570.21006997872539704No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA1460.19535169996119728No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA1440.1926756492767973No Hit
GCTGCGTTCTTCATCGATGCCTTCCTTAACGTGGACAAAGGATTGGTCAA1410.18866157325019733No Hit
GCTGCGTTCTTCATCGATTCGAGAGCCGAGATATCCGTTGCCGAGAGTCG1410.18866157325019733No Hit
GCTGCGTTCTTCATCGATGCGTTGTTATTCTACTTCGCAAATCAAAATAA1380.1846474972235974No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG1080.14450673695759797No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCCTT1060.141830686273198No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTAG1050.14049266093099805No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGGGTGAACACTGTAATGTCTTC1040.13915463558879806No Hit
GCTGCGTTCTTCATCGATGCCTTCTCCGGGAGAATCTGCCGCGCCGCCCG1010.13514055956219811No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATACGTTGCCGAGAGTCG1000.13380253421999813No Hit
GCTGCGTTCTTCATCGATGAGAGAGCCGAGATATCCGTTGCCGAGAGTCG1000.13380253421999813No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCT990.13246450887779815No Hit
GCTGCGTTCTTCATCGATGCCGAGGCGGACCTCGCCGGGGATCACGTTCA980.13112648353559817No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT940.12577438216679823No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCGAC930.12443635682459826No Hit
GCTGCGTTCTTCATCGATGCCGCTGCTATTGCCGTGAATGCCTCGACGCG900.12042228079799831No Hit
GCTGCGTTCTTCATCGATGCGAGAGACGAGATATCCGTTGCCGAGAGTCG900.12042228079799831No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCTTTGCCGAGAGTCG870.11640820477139836No Hit
GCTGCGTTCTTCATCGATGCGAGAGCTGAGATATCCGTTGCCGAGAGTCG860.11507017942919838No Hit
GCTGCGTTCTTCATCGATGCCAAAACCATGCCGCTGGACGCGTCTGCGCT840.11239412874479843No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCAAGAGTCG820.10971807806039846No Hit
GCTGCGTTCTTCATCGATGCAGCTGTCGGTAAGCTGCGTTCTTCATCTGC790.10570400203379851No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT780.10436597669159853No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTTCCGAGAGTCG760.10168992600719857No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGTCGAGAGTCG750.10035190066499859No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)