FastQCFastQC Report
Sun 21 May 2023
EGAF00007832738

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832738
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences115095
Sequences flagged as poor quality0
Sequence length236-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG3205627.85177462096529No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGAT2179818.939137234458492No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT55694.838611581736826No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT44273.846387766627569No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA40773.542291150788479No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGGC40073.4814718276206613No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT35773.107867413875494No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT28392.4666579781919284No Hit
GCTGCGTTCTTCATCGATGGTCCGTACCTTGGCTGCGTTCTTCATCGATG25352.2025283461488336No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG24552.133020548242756No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT19631.7055475911203786No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG18391.5978105043659585No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG16721.4527129762370214No Hit
GCTGCGTTCTTCATCGATGCGGTTGATGGTGGTGCCGCCGTAAATATGGC11160.9696337807897825No Hit
GCTGCGTTCTTCATCGATGTCCGTACCTTGGCTGCGTTCTTCATCGATGT11040.9592076111038708No Hit
GCTGCGTTCTTCATCGATGCCGCCAGGCAGACCTACGAATACGCCGAAGT7070.6142751639949606No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT7060.6134063165211348No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGCC6860.5960293670446153No Hit
GCTGCGTTCTTCATCGAAGAAAGGCACTGGTAGGCCTAAGTGGACTTGAA6750.5864720448325297No Hit
GCTGCGTTCTTCATCGATGCCGTACCTTGGCTGCGTTCTTCATCGATGCC5460.47439072070897953No Hit
GCTGCGTTCTTCATCGATTTCACCCAACAATGCTTCAGGAGAAACGACAA4990.43355488943915893No Hit
GCTGCGTTCTTCATCGATGGTCCGTACCTTGGCTGCGTTCTTCATCGGCT4680.4066206177505539No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG3930.34145705721360614No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG3910.33971936226595423No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC3700.32147356531560883No Hit
GCTGCGTTCTTCATCGATGCCCGTACCTTGGCTGCGTTCTTCATCGATGC3340.2901950562578739No Hit
GCTGCGTTCTTCATCGCAGCTTCGACAGTGAAGCAGTTCAGGTCGACAAT3270.2841131239410921No Hit
GCTGCGTTCTTCATCGGTCCGTACCTTGGCTGCGTTCTTCATCGGTCCGT3250.2823754289934402No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT2890.2510969199357053No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2790.24240844519744562No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCTGC2430.21112993613971068No Hit
GCTGCGTTCTTCATCGATGCTCCGTACCTTGGCTGCGTTCTTCATCGATG2240.19462183413701725No Hit
GCTGCGTTCTTCATCGATGTCCGTACCTTGGCTGCGTTCTTCATCGATGC2210.19201529171553933No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2100.18245796950345367No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1990.172900647291368No Hit
GCTGCGTTCTTCATCGATGTCCGTACCTTGGCTGCGTTCTTCATCGGCTC1980.17203179981754202No Hit
GCTGCGTTCTTCATCGATGCCCCTTCCTTCCCATGCCTTAGCTTCCTCCT1980.17203179981754202No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1960.1702941048698901No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGGT1890.1642121725531083No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCTTT1860.1616056301316304No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT1860.1616056301316304No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1720.14944176549806681No Hit
GCTGCGTTCTTCATCGATGCGCTGGGCTATCCCTTCTGCCGTGGCCGTCT1700.14770407055041487No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCCTT1660.14422868065511102No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGGA1620.1407532907598071No Hit
GCTGCGTTCTTCATCGATGCTCATCAGGGATATTGGCCTAAAATTTTCTT1590.1381467483383292No Hit
GCTGCGTTCTTCATCGATGCGTGACTGTTGGGCCCCACTGCTGCGACTCT1510.13119596854772145No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTCGAAAGTTG1500.1303271210738955No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCTCT1490.1294582736000695No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG1300.11295017159737607No Hit
GCTGCGTTCTTCATCGATGCGTCCGTACCTTGGCTGCGTTCTTCATCGAA1270.11034362917589817No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG1250.10860593422824623No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)