FastQCFastQC Report
Sun 21 May 2023
EGAF00007832744

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832744
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75323
Sequences flagged as poor quality0
Sequence length237-238
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCGAT2186229.024335196420747No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT1586221.058640787010606No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCGGC73959.817718359597997No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA30754.082418384822697No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT23793.1583978333311205No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG16362.171979342299165No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA16052.1308232545172126No Hit
GCTGCGTTCTTCATCGATGCCGTTTCCGAGGCCGGACGATCGGGCAAACT14881.975492213533715No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAAAAACAGGAACAACACCAACGTG12371.6422606640733906No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT11231.490912470294598No Hit
GCTGCGTTCTTCATCGATGTTACGTATTCGGCTGCGTTCTTCATCGATGT8091.0740411295354673No Hit
GCTGCGTTCTTCATCGATGCCTAGTGCCAAGGCATCCACCGTATGCCCTT6570.8722435378304104No Hit
GCTGCGTTCTTCATCGATGCTGTTTAATTTTTCAAGAACGAGTTCGTAAT5750.7633790475684717No Hit
GCTGCGTTCTTCATCGATGGTTACGTATTCGGCTGCGTTCTTCATCGATG5610.7447924272798482No Hit
GCTGCGTTCTTCATCGAAACGTGCACGTTTCGTTGAAGATAATACGCACG5130.6810668720045671No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG4950.6571697887763366No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT4910.6518593258367299No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT4580.608048006584974No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTG3980.5283910624908726No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCT3260.4328027295779509No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA3150.4181989564940323No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTG3100.4115608778195239No Hit
GCTGCGTTCTTCATCGATGTTACGTATTCGGCTGCGTTCTTCATCGGCTC2180.28942023020856844No Hit
GCTGCGTTCTTCATCGACTCTTGGTGCCAAGGCATCCGCCTTACGCCCTT2120.2814545357991583No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGATGCCGGACGATCGGGCAAACT1960.2602126840407312No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA1910.2535746053662228No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCTAGATATCCGTTGCCGAGAGTCA1880.24959175816151774No Hit
GCTGCGTTCTTCATCGATGGTTACGTATTCGGCTGCGTTCTTCATCGGCT1770.23498798507759913No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCTGC1680.22303944346348392No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1650.21905659625877888No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT1650.21905659625877888No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACTATCGGGCAAACT1610.21374613331917208No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAAGCCGGACGATCGGGCAAACT1540.20445282317486027No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1520.20179759170505687No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGTCAAACT1490.19781474450035183No Hit
GCTGCGTTCTTCATCGGCGCAGTCCTTGTCATTTACTACAAACAAATTTC1460.19383189729564673No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCTGACGATCGGGCAAACT1400.18586620288623662No Hit
GCTGCGTTCTTCATCGATGTTACGTATTCGGCTGCGTTCTTCATCGATGC1250.16595196686271127No Hit
GCTGCGTTCTTCATCGATGCTCTGTGGGTACTTGCCAGCCAAATGAAGAC1190.1579862724533011No Hit
GCTGCGTTCTTCATCGATGCGTTTTTGTTCTCTGTTTTTTTCTTTACGCC1110.1473653465740876No Hit
GCTGCGTTCTTCATCGATGGTGGGATCTTCGGGGAGGGGTTCGTCGCTGA1020.13541680495997238No Hit
GCTGCGTTCTTCATCGATGCAGGGCGAGAGGGTGAGCTTATCTTCAGATA960.12745111055056227No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCTGGCAAACT920.12214064761095547No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCATCGAA920.12214064761095547No Hit
GCTGCGTTCTTCATCGATGCTGGAACCAAGAGATCCGTTGTTGAAAGTTT890.11815780040625042No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACATGCGTGT880.11683018467134872No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAACAAAGGAACAACACACATGTGT870.11550256893644703No Hit
GCTGCGTTCTTCATCGATGCCTTTGCCGAAGACGAACCGTGGCGGGCCGT830.11019210599684028No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT820.10886449026193859No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGTCCGGACGATCGGGCAAACT820.10886449026193859No Hit
GCTGCGTTCTTCATCGATGCGTTACGTATTCGGCTGCGTTCTTCTTCTGC770.10222641158743014No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)