FastQCFastQC Report
Sun 21 May 2023
EGAF00007832747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72576
Sequences flagged as poor quality0
Sequence length247-250
%GC51

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGAAGTAAAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATC1933126.635526895943563No Hit
GGAAGTAAAAGTCGTAACAAGGGCGGGTGTGGTGTTCCAAGCAAGGCAGG1239617.080026455026456No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTAGGGGAACCTGCGGCTGGATC811811.185515873015873No Hit
GGAAGTAAAAGTCGTAACAAGGTTTCTGTAGGTGAACCTGCAGAAGGATC61988.540013227513228No Hit
GGAAGTAAAAGTCGTAACAAGGGCTGGCAGGGGCTGTGGGAGGAGTTTGT37905.222111992945326No Hit
GGAAGTAAAAGTCGTAACAAGGACATTCAAAAGGGGAGCGCGCGGAAGTG33314.58967151675485No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGAGAAACACGTCAAAGGCCTAAGAA28643.9462081128747792No Hit
GGAAGTAAAAGTCGTAACAAGGAAAACAGTGAACAGCCTCAGTTCCCTGG20932.8838734567901234No Hit
GGAAGTAAAAGTCGTAACAAGGAACGAAGATGAAGGACACCTCTCCGGCA20332.8012014991181657No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTATCGGAAGGTGCGGCTGGATC19792.726796737213404No Hit
GGAAGTAAAAGTCGTAACAAGGTATCCGTACGGGAACGTGCGGATGGATC10591.4591600529100528No Hit
GGAAGTAAAAGTCGTAACAAGGTTTACGTAGGTGAACCTGCGGAAGGATC6610.9107694003527338No Hit
GGAAGTAAAAGTCGTAACAACACTAAATCTTATCTCCAGCCCTCAGAAGG5860.8074294532627866No Hit
GGAAGTAAAAGTCGTAACAAGGACGAGGTGGACATCCGCGTGGCGATCAG4670.6434634038800705No Hit
GGAAGTAAAAGTCGTAACAACCCGGTTCTTTTTTGAGCACCTCGGCAACG3630.500165343915344No Hit
GGAAGTAAAAGTCGTAACAAGGGCAGAGCGAGGACAAGGGTGCAAATGGC2830.3899360670194003No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCGAATCTAATAATGAAGAATCAG2790.38442460317460314No Hit
GGAAGTAAAAGTCGTAACAAGGGCCAGCCAGGGAGAGGTCTCCCCAGGCC2380.32793209876543206No Hit
GGAAGTAAAAGTCGTAACAAGGAGGTGCGTGAGATCGTGCAGCAGAGCCT2250.3100198412698413No Hit
GGAAGTAAAAGTCGTAACAAGGTCTCCGTTGGTGAACCAGCGGAGGGATC2090.28797398589065254No Hit
GGAAGTAAAAGTCGTAACAAGGAAAAGTGGGATAGTTTCTTCTTTGGAGA1950.26868386243386244No Hit
GGAAGTAAAAGTCGTAACAAGGGATAACTCATGGCTCAAGCAGAGCAAAA1870.25766093474426804No Hit
GGAAGTAAAAGTCGTAACAACAGGAGAGCGTCAGCCAATCGCCTCAATCG1630.224592151675485No Hit
GGAAGTAAAAGTCGTAACAAGGGGGCTGTTGCGGGCAGGTGTCGTTTTGT1600.2204585537918871No Hit
GGAAGTAAAAGTCGTAACAAGGTATCAGTAGGTGAACCTGCTGATGGATC1560.21494708994708994No Hit
GGAAGTAAAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATC1430.1970348324514991No Hit
GGAAGTAAAAGTCGTAACAAGGCGATCTCAAAACAGTGACGTTTTGCGTA1380.19014550264550265No Hit
GGAAGTAAAAGTCGTAACAAGGCAAACCTCAGAGCACCTTCGTTAGTCCA1350.18601190476190474No Hit
GGAAGTAAAAGTCGTAACAAGGGACTGGAGTTCGAAATCGGCTGGCGCGA990.13640873015873015No Hit
GGAAGTAAAAGTCGTAACAAGGTTCGAGGGTGGCGCATCTCACACGGGAA980.13503086419753085No Hit
GGAAGTAAAAGTCGTAACAAGGCAAGTGTTCGAGGAGTTGGGGAAGGGCG970.13365299823633156No Hit
GGAAGTAAAAGTCGTAACAAGGCCTTGGGTCCAGGCCAGGCCACTGTGCT960.13227513227513227No Hit
GGAAGTAAAAGTCGTAACAAGGGAAACAACAGCAAAGGTGCCAAGGGGCA950.13089726631393298No Hit
GGAAGTAAAAGTCGTAACAAGGCGGCCGATGGCAGCATCTACAACGTCGG920.1267636684303351No Hit
GGAAGTAAAAGTCGTAACAAGGCAGGGTGGTGCTAGACCATGGGAAACGG810.11160714285714285No Hit
GGAAGTAAAAGTCGTAACAAGGGCGATGTGAAGACCCGATGCAATGCCAG810.11160714285714285No Hit
GGAAGTAAAAGTCGTAACAAGGGCGAGTGTGGTGTTCCAAGCAAGGCAGG770.10609567901234568No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)