FastQCFastQC Report
Sun 21 May 2023
EGAF00007832748

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832748
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72576
Sequences flagged as poor quality0
Sequence length235-238
%GC52

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGGTG1239517.078648589065256No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG774810.675705467372135No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA750110.335372574955908No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG61868.523478835978835No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT39585.453593474426808No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC37735.198688271604938No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG36254.994764109347442No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG33534.619984567901234No Hit
GCTGCGTTCTTCATCGATGCAAACCTCGGCCGCACCCCAAGGCCTTGCTG28753.961364638447972No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT20332.8012014991181657No Hit
GCTGCGTTCTTCATCGATGCCGCTTCCGAGGCCGGACGATCGGGCAAACT19872.7378196649029984No Hit
GCTGCGTTCTTCATCGTTTCGAAACGCCTAGGCATCCGCCGTATGCCCTT13641.8794091710758378No Hit
GCTGCGTTCTTCATCGATGCCGGAACCAAGAGATCCGTTGTTGAAAGTTT13571.8697641093474426No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGCTAAGAGTCG11361.5652557319223985No Hit
GCTGCGTTCTTCATCGACTCTTACTACCTAGGCATCCTTTGTGTGCCCTT7130.9824184303350971No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCA7010.9658840388007055No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC5700.7853835978835979No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCTGTTGCCGAGAGTCG5180.7137345679012346No Hit
GCTGCGTTCTTCATCGATGCGACCGAACTCGATCTCTTCCAGCTCTTCCT4520.6227954144620811No Hit
GCTGCGTTCTTCATCGATGTGCAAACGATCTTCCATAAAATGGAGCGTCG3600.496031746031746No Hit
GCTGCGTTCTTCATCGATGCGGTTGTAGAGGAGTTCGATGTGGTGAAGTG2810.3871803350970017No Hit
GCTGCGTTCTTCATCGATGCGTAGACAGACGAAGCACAGCCAAGTAGCAG2720.37477954144620806No Hit
GCTGCGTTCTTCATCGATGCGCCCTCAAAACTAGACAATGCAAAACTTGG2460.33895502645502645No Hit
GCTGCGTTCTTCATCGATGCCTATCACACCATTTAAGATGTTTTCCTGTG2410.33206569664902996No Hit
GCTGCGTTCTTCATCGATGCTGGGGATACATTCGTAGTGCCACACCTCCT2220.3058862433862434No Hit
GCTGCGTTCTTCATCGATGCCAGAACCAAGAGATCCGTTGTTGAAAGTTT2190.30175264550264547No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGCCGAGAGTCG1980.2728174603174603No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA1970.271439594356261No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA1960.2700617283950617No Hit
GCTGCGTTCTTCATCGATGCACACAGGAGCTCAGAATATACCTAGTGAAG1950.26868386243386244No Hit
GCTGCGTTCTTCATCGATGCCAGTTGGCGCGTAAACACCGTGATGTCTTC1860.2562830687830688No Hit
GCTGCGTTCTTCATCGATGCTGTGGTGGTGACGGTGGCTGCTGCGCTGGG1680.23148148148148145No Hit
GCTGCGTTCTTCATCGATGCTGTCCATGGTCACGCGATGCTCTCCTCGAT1610.2218364197530864No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGATATCCGTTGTTAAGAGTCG1570.21632495590828923No Hit
GCTGCGTTCTTCATCGACTCCTGACGCCAAGGCATCCACCGTATGCCTTT1530.21081349206349206No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCAAGAGATCCGTTGTTGAAAGTTT1390.19152336860670194No Hit
GCTGCGTTCTTCATCGATGCGCTCCCACTGGATCCGGTCACCCAGCAGGA1340.18463403880070545No Hit
GCTGCGTTCTTCATCGATGCGCTCGATGCGGTCGTCACCTTTGAAAAGGC1320.18187830687830686No Hit
GCTGCGTTCTTCATCGATGCGATAAAGGTTGGCATCGTGTTTAATGGTTG1310.18050044091710757No Hit
GCTGCGTTCTTCATCGATGCACGAGCCGAGTGATCCACCGATAAGAGTCG1260.1736111111111111No Hit
GCTGCGTTCTTCATCGATGGGAGAGCCAAGAGATCCGTTGCTGAAAGTTG1230.16947751322751323No Hit
GCTGCGTTCTTCATCGATTCGAAACGCCTAGGCATCCGCCGTATGCCCTT1200.16534391534391535No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA1180.16258818342151674No Hit
GCTGCGTTCTTCATCGATGCCTGTGAACCGATAACCGCGGTAGTAATAGA1000.13778659611992944No Hit
GCTGCGTTCTTCATCGATGCCCTTCACCGACTCTGCGTTGCGCTTCTGCT960.13227513227513227No Hit
GCTGCGTTCTTCATCGATGCGGCCGCCGTTCCCGCCGCGTCGTGTGTGGC960.13227513227513227No Hit
GCTGCGTTCTTCATCGATGCCAGGCAAAAACAGGAACAACACACACGTGT950.13089726631393298No Hit
GCTGCGTTCTTCATCGATGCCTTGTAAGAATTCAGTTAGTTGACTTTTTG950.13089726631393298No Hit
GCTGCGTTCTTCATCGACACGAGAGCCAAGATATCCATTGCCAGGAGTCA950.13089726631393298No Hit
GCTGCGTTCTTCATCGGCGCTTACTACCTAGGCATCCTTTGTGTGCCCTT940.12951940035273368No Hit
GCTGCGTTCTTCATCGATGCCCAGTAAGCTAAGGAGAAAACACACCCACA940.12951940035273368No Hit
GCTGCGTTCTTCATCGATGCCCTCCACCCCTTGCTCGCCGCGCAGGAGTT900.1240079365079365No Hit
GCTGCGTTCTTCATCGATGCTATTGTCCACCGTGTCTGCCATCCAAAATA850.11711860670194003No Hit
GCTGCGTTCTTCATCGATATGGTTCGGATCTGTGACCCAGTCCAAATCTC770.10609567901234568No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTACTATTTACTTTGCAAATTA740.10196208112874779No Hit
GCTGCGTTCTTCATCGATGCGTGGTTTTCGCAAATTAAAGCAGTCTGATT730.1005842151675485No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)