FastQCFastQC Report
Sun 21 May 2023
EGAF00007832750

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00007832750
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences151187
Sequences flagged as poor quality0
Sequence length237-238
%GC55

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATCAAAATAA4834831.9789399882265No Hit
GCTGCGTTCTTCATCGATGCGAGAGCCGAGATATCCGTTGCCGAGAGTCG4227327.960737364985082No Hit
GCTGCGTTCTTCATCGATGCCGATTTGTTTCTCAAAATCACCCTGACCAT3059520.23652827293352No Hit
GCTGCGTTCTTCATCGATGGGAGAACCAAGAGATCCGTTGTCGAAAGTTG89615.927096906480054No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGAT25911.7137716867190962No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGATG15561.0291890175742624No Hit
GCTGCGTTCTTCATCGATGCCCGCATGCCTGTTCGTCGCTACGAGGTGCT8100.5357603497655221No Hit
GCTGCGTTCTTCATCGATGCGGAGCTTGACGTCGCGTGGGCAGATCATCC8070.5337760521737981No Hit
GCTGCGTTCTTCATCGATGCTTCTCAGTCCAAAGCGTACTCCACAACAGG7230.47821571960552167No Hit
GCTGCGTTCTTCATCGATGCGAGAACCAAGAGATCCGTTGTTGAAAGTTT6000.39685951834483124No Hit
GCTGCGTTCTTCATCGATGAGTGACTGTTGGGCCCCACTGCTGCGACTCT5550.3670950544689689No Hit
GCTGCGTTCTTCATCGATGCATTCAATATTGCTATTTACTTTGCAAATTA5050.33402342794023293No Hit
GCTGCGTTCTTCATCGATGCCAGTGAGATACGGCTGCGTTCTTCATCGGC4570.30227466647264645No Hit
GCTGCGTTCTTCATCGATGCCGATATGTTTCTCAAAATCACCCTGACCAT3870.2559743893324161No Hit
GCTGCGTTCTTCATCGATGCAAGAGCCGAGATATCCGTTGCCGAGAGTCG3660.24208430619034704No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTCCACTTCGCAAATCAAAATAA3510.2321628182317263No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTCGCAAATCA3430.22687135798712854No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTTCACTTCGCAAATCAAAATAA2830.1871854061526454No Hit
GCTGCGTTCTTCATCGATGCTGTCCGATGTTACGGTAGTGGGCGTCTTCA2610.1726338904800016No Hit
GCTGCGTTCTTCATCGATGCGTTCAATATTGCTATTTACTTTGCAAATTA2510.1660195651742544No Hit
GCTGCGTTCTTCATCGATGCAGTGAGATACGGCTGCGTTCTTCATCGGCT2490.16469670011310497No Hit
GCTGCGTTCTTCATCGATGCCATCTGGCCATGGTTGAGGAGGGTGGGAGC2070.1369165338289668No Hit
GCTGCGTTCTTCATCGATGCGTCGATATTTCACTTCGCAAATTAAAATAA1960.12964077599264487No Hit
GCTGCGTTCTTCATCGATGCGTTGATATTCCACTTCGCAAATCAAAATAA1700.11244353019770217No Hit
GCTGCGTTCTTCATCGATGCAGGTGATGAGACCAGGGAGACCGCCGAACT1580.10450633983080555No Hit
GCTGCGTTCTTCATCGATGCATATGTGGTGTGGCCCACATTTCTGTATGC1560.10318347476965613No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)